miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|30965400|gb|CD221966.1|CD221966 GGGGCGGTGGACGCCCATGCGCGAGTCCTGGGGATCCATCTGGCGGATGGACACCAACCACCGCATGCAGCCGCCCTTCT
CCATCCGCATCCGCAAAGAGTCCGGCAAGACGCTCGTCGCCAGAAACGTCATCCCGGCCAACTGGAGGCCCAACACTTTC
TACCGCTCCTTCGTCCAGTACCAGTAGTAGCACGTACGTACCTGATTGATTGATTGATTGATTGGATCCCAGCCCAGCCC
GGCCCAGCCCGCAATTGGAGTGGAATCCGGCTCGGTTCGGTTCGGTTCGGTCATCATCATCACTACGTACGTACTATACG
CTACTACCACTAGACGACTACTACTGCTACCAAGTACGGCGAAACGGAACGGCTAGTCGTTGTGTCTCTGGTCATCGTGT
CGTTGCAGTTGTATCATGGTCCTTGGAGTGAGTCGTTGCATGCATTGGGGGCGCGCTTTTAGGTCAGGCGTCATGTGCGA
GTGTTTGTGGGTCTGTAAGGCTGGCATGTGCATGGTGCGTGACCCTAATTGCAAAAAAAAAGAGAGAGAGAACTAAGCCG
TGTGGGAAAATGGAGGAGGCAGGCGTACAAGGTACGCTCTCCCGCCCACTATTGCTTTATAATTTATATCATCAT




Most similar to sp|Q94LR4|EXPB4_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q94LR4|EXPB4_ORYSJ Expansin-B4 OS=Oryza sativa subsp. japonica
           GN=EXPB4 PE=2 SV=1
          Length = 286

 Score =  125 bits (313), Expect = 3e-28
 Identities = 55/60 (91%), Positives = 57/60 (95%)
 Frame = +2

Query: 2   GRWTPMRESWGSIWRMDTNHRMQPPFSIRIRKESGKTLVARNVIPANWRPNTFYRSFVQY 181
           GRWTPMRESWGSIWR+DTNHR+Q PFSIRIR ESGKTLVA NVIPANWRPNTFYRSFVQY
Sbjct: 226 GRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKTLVANNVIPANWRPNTFYRSFVQY 285