miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|312049681|gb|GW890116.1|GW890116 GATAACACAACACAAATTCATACATCATCTTTGTGAAAATGGCTCCAATTGCTGTGGGAGATGCTATTCCAGACGGCATT
TTGGCTTATCTGGATGATGAAAACAAACCCCAAACTGTTTCCATTCACTCTCTTGCCGCCGGCAAGAAAGTTATCATCTT
TGGTGTTCCCGGTGCCTTCACTCCTACATGCAGCTTGAAGCACGTGCCCGGCTTCATTGAGAGAGCAGAAGAGCTGAAAG
GAAAGGGTGTGGATGAAGTAATCTGTATCAGTGTGAATGACCCCTTTGTGATGAACTCATGGGCCAAAACTTTCCCAGAG
AACAAGCATGTGAAGTTCCTTGCTGATGGTGCTGCCAAATACACCAACGCTCTTGGGCTTGAGCTTGACCTCACAGAGAA
GGGGCTTGGTGTTCGATCAAGGAGGTTTGCTCTTCTGGTGGAAGACCTCAAGGTGAAGGTTGCCAATGTTGAAAGTGGAG
GAGAGTTCACTGTCTCCAGTGCTGAAGAGATCATCAAGGCTCTCTAAGAATCCTTCATTCCTTCCTCATAGCTGTGTTGG
TCCTTTGATGTCCCCAATGTTTGTGACTCTTTTGATGCTCAAACTTTGAAACATTTTCATAGGTGTAATGGTGTTGTGTG
CTTTCAGAAGGGTATGATGTGGTGCATGTTATGGAAATAAATAAGCTTACTAGTTTGAAGTGTTTTGGAATTAAAAAAAA
TATTCACAGAAGTAACATGTTCAACTTCTTTCTGTCTTGCAATTTTCACTTCTTTCCTCTTTTATCTTGTAATTATTACC
ACTCTTGAGTAACATGTTTGCACGGGCAAGTTCATC




Most similar to sp|Q9XEX2|PRX2B_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9XEX2|PRX2B_ARATH Peroxiredoxin-2B OS=Arabidopsis thaliana
           GN=PRXIIB PE=1 SV=1
          Length = 162

 Score =  266 bits (679), Expect = 2e-70
 Identities = 124/162 (76%), Positives = 148/162 (91%)
 Frame = +3

Query: 39  MAPIAVGDAIPDGILAYLDDENKPQTVSIHSLAAGKKVIIFGVPGAFTPTCSLKHVPGFI 218
           MAPIAVGD +PDG +++ D+ ++ QT S+HSLAAGKKVI+FGVPGAFTPTCS+KHVPGFI
Sbjct: 1   MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60

Query: 219 ERAEELKGKGVDEVICISVNDPFVMNSWAKTFPENKHVKFLADGAAKYTNALGLELDLTE 398
           E+AEELK KGVDE+IC SVNDPFVM +W KT+PENKHVKF+ADG+ +YT+ LGLELDL +
Sbjct: 61  EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120

Query: 399 KGLGVRSRRFALLVEDLKVKVANVESGGEFTVSSAEEIIKAL 524
           KGLGVRSRRFALL++DLKV VANVESGGEFTVSSA++I+KAL
Sbjct: 121 KGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILKAL 162