miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|31334082|gb|CD427772.1|CD427772 CAGGATCGGCTTCCCTGCCAAGATCAAGGTGAAGAAAGAGCACGCTTCGGTGCCGTTCGATGACCAGTGTTCCATCCTGG
AGAAGGAGGCCGTGAACGTGTCCCTCGACAACCTCAAGACGTACCCCTTCGTCAAGGAAGGGCTGGCCAACGGGACCCTC
AGGCTGGTCGGCGGCCACTACAACTTCGTGTCAGGGGAGTTCGACACATGGGAAATTAAGAGCTAAGCTGCCCGGCCGGC
CGCTTAACAACTCCTACCATCATCATAAATATATATACTACATACCTACCGATATGCACCCGATCGATGTGAATGCGTGG
AGTATTACTCATGTTTTCTGCATGCAGCGACATATATATATATATACCGGATCGCCCAATGTGAATGTAATAAGTAATAG
CATTTTCTACCGCTTTTATTTCTAACGCCGAGCTTTCATGTACTATATAATGTGTTATATGATGAGTAATTTGACCGCCC
TGTGGTCAAAAGACATCAGCTATAATCCTTTTTTCGCAATATTTATTATGAAGCGTTTACCTC




Most similar to sp|P40880|CAHC_HORVU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum
           vulgare PE=2 SV=1
          Length = 324

 Score =  122 bits (305), Expect = 2e-27
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = +2

Query: 2   RIGFPAKIKVKKEHASVPFDDQCSILEKEAVNVSLDNLKTYPFVKEGLANGTLRLVGGHY 181
           RIGFPAK KV+ E AS+PFDDQC++LEKEAVNVSL NL TYPFVKEG+ NGTL+LVGGHY
Sbjct: 253 RIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHY 312

Query: 182 NFVSGEFDTWE 214
           +FVSG+F+TWE
Sbjct: 313 DFVSGKFETWE 323