miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|31346111|gb|CD430468.1|CD430468 TCCACTTCGTTGAGGACTGGGTCAGGATCGGCTTCCCTGCCAAGATCAAGGTGAAGAAAGAGCACGCTTCGGTGCCGTTC
GATGACCAGTGTTCCATCCTGGAGAAGGAGGCCGTGAACGTGTCCCTCGACAACCTCAAGACGTACCCCCTCGTCAAGGA
AGGGCTGGCCAACGGGACCCTCAGGCTGGTCGGCGGCCACTACAACTTCGTGTCAGGGGAGTTCGACACATGGGAAATTA
AGAGCTAAGCTGCCCGGCCGGCCGCTTAACAACTCCTACCATCATCATAAATATATATACTACATACCTACCGATATGCA
CCCGATCGATGTGAATGCGTGGAGTATTACTCATGTTTTCTGCATGCAGCGACATATATATATATATACCGGATCGCCCA
ATGTGAATGTAATAAGTAATAGCATTTTCTACCGCTTTTATTTCTAACGCCGAGCTTTCATGTACTATATAATGTGTTAT
ATGATGAGTAATTCGACCGCCCTGTGGTCAAAAGACATCAGCTATAATCCTTTTTTCGCAATATTTATTATGAAGCGTTT




Most similar to sp|P40880|CAHC_HORVU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum
           vulgare PE=2 SV=1
          Length = 324

 Score =  136 bits (343), Expect = 8e-32
 Identities = 62/78 (79%), Positives = 71/78 (91%)
 Frame = +3

Query: 3   HFVEDWVRIGFPAKIKVKKEHASVPFDDQCSILEKEAVNVSLDNLKTYPLVKEGLANGTL 182
           HFVEDWVRIGFPAK KV+ E AS+PFDDQC++LEKEAVNVSL NL TYP VKEG+ NGTL
Sbjct: 246 HFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTL 305

Query: 183 RLVGGHYNFVSGEFDTWE 236
           +LVGGHY+FVSG+F+TWE
Sbjct: 306 KLVGGHYDFVSGKFETWE 323