miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|33558268|gb|BX629140.1|BX629140 CTGGTCATATTCGGTGGACTGACGGGCTACTCGTCTGATGACATCAACAAGTTCCTGTGGATGGTGCGCATCGGCGGCAG
TACGGACCGGGGCGCCCACATCAAGGAGATGGACTATTACGCGCCGAGCGGTGACTTCCGGATCGACAAGGAGGGTTCGC
CGGTGCTGCTCAACTGTCTGATGTACAAGATGTGCTACTACCGGTTCGGGCAGGTCTACACCGAGGGTGGCAAAGCGCCC
GGGTACGATCGGGTACGGGGTGCCGAGATCGGCAACAAGGACTTTGAGCTGGATGTGCTCGAGGAGGCGTACACGACCGA
ACACTGGCTGGTGCGAATCTACAAGGTGAAGGATCTCAGCAACCGTGGTGTCTAATTGGCTGCGTCAGCAGCTGCAACAA
CAACCCTTCGCTTTATGTCGATTTGCTCGAGTCGGGTTGCGTAGTCATAGAACTCCCCCTACTTAACATTACTTCTTCTT
CTCTCTCTCTATAAACGATCGGTTTGCATCCCAGCCGTAAGTTGAATATGTTTCCCTACAAAAGCATACACCCACCCCAC
ACAACACCTCATTTACGACCGCTGCCTTAAACGATGCAAACAAACAAACATACAAAACACACACACATATATATACAGGG
GACAGTTTATTGAATTGAAGGATTCTATTTTGGTAATTGCGTATTGTAAGAATTTNCCCCTTTTTTTTGCTATGGGT




Most similar to sp|Q5RCE2|STT3A_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5RCE2|STT3A_PONAB Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit STT3A OS=Pongo abelii
           GN=STT3A PE=2 SV=1
          Length = 705

 Score =  234 bits (597), Expect = 4e-61
 Identities = 108/124 (87%), Positives = 115/124 (92%)
 Frame = +1

Query: 1   LVIFGGLTGYSSDDINKFLWMVRIGGSTDRGAHIKEMDYYAPSGDFRIDKEGSPVLLNCL 180
           LVIFGGLTGYSSDDINKFLWMVRIGGSTD G HIKE DYY P+G+FR+D+EGSPVLLNCL
Sbjct: 579 LVIFGGLTGYSSDDINKFLWMVRIGGSTDTGKHIKENDYYTPTGEFRVDREGSPVLLNCL 638

Query: 181 MYKMCYYRFGQVYTEGGKAPGYDRVRGAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLS 360
           MYKMCYYRFGQVYTE  + PG+DRVR AEIGNKDFELDVLEEAYTTEHWLVRIYKVKDL 
Sbjct: 639 MYKMCYYRFGQVYTEAKRPPGFDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLD 698

Query: 361 NRGV 372
           NRG+
Sbjct: 699 NRGL 702