miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|34441037|gb|CF428336.1|CF428336 AAAATTGCATCAATGCCCCTCCCTTCTCTCTCTGTCTATACCCCCTCATACTGCATCACGATCAAGAGCATGTATGCAAG
TTGGTCTTTCTAGGGATGGCGAACTGACCGGCGATTTTCTGGTTATTCGTCCTGCAGGACATGGCGGACGCCGTCGACCG
CTTGAAGACCGGGTTCAACAAGTTCAAGACCGAGGTCTATGACAAGAAGCCGGAGCTGTTCGAGCCTCTCAAGGCCGGCC
AGTCCCCCAAGTACATGGTGTTTGCGTGCTCCGACTCCCGTGTGTGCCCGTCGGTGACCCTGGGTCTGCAGCCCGGTGAG
GCCTTCACCGTCCGCAACATCGCCGCCATGGTCCCAGCCTACGACAAGACCAAGTACACCGGCATTGGGTCTGCCATTGA
GTACGCCGTGTGCGCCCTCAAGGTGCAGGTCCTCGTCGTCATTGGCCACAGCTGCTGTGGTGGCATCAGGGCGCTCCTCT
CCCTCCAGGATGGCGCACCTGACACCTTCCACTTCGTTGAGGACTGGGTCAGGATCGGCTTCCCTGCCAAGATCAAGGTG
AAGAAAGAGCACGCTTCGGTGCCGTTCGATGACCAGTGTTCCATCCTGGAG




Most similar to sp|P40880|CAHC_HORVU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum
           vulgare PE=2 SV=1
          Length = 324

 Score =  269 bits (687), Expect = 1e-71
 Identities = 128/157 (81%), Positives = 144/157 (91%)
 Frame = +3

Query: 141 MADAVDRLKTGFNKFKTEVYDKKPELFEPLKAGQSPKYMVFACSDSRVCPSVTLGLQPGE 320
           M  AV+RLKTGF KFKTEVYDKKP+ FEPLKAGQ+PKYMVFAC+DSRVCPSVTLGL+PGE
Sbjct: 123 MDAAVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGE 182

Query: 321 AFTVRNIAAMVPAYDKTKYTGIGSAIEYAVCALKVQVLVVIGHSCCGGIRALLSLQDGAP 500
           AFT+RNIA MVPAY K KY G+GSAIEYAVCALKV+V+VVIGHS CGGI+ALLSL+DGA 
Sbjct: 183 AFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGAD 242

Query: 501 DTFHFVEDWVRIGFPAKIKVKKEHASVPFDDQCSILE 611
           D+FHFVEDWVRIGFPAK KV+ E AS+PFDDQC++LE
Sbjct: 243 DSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLE 279