miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|34444004|gb|CF431303.1|CF431303 GAGCATGAAAAAATCATGGAAAGAAGGGTGGATCCAGACTCTGATATCACCTGGGAGGAGTACAAGTCTATGAAATTCAC
ATCTCACGTCATACATGAATCTCTTAGGCTCGCAAACATCGCTCCGGTGGTGTTCAGACAAGCAAACCAGGACGTACACA
TAAAGGGATACACTATCCCAGAAGGATCAAAGATCATGATTTGTCCATCTGCAGCTCACCTGAATTCAAAGGTTTACGAG
GACCCCTTGGCATTCAATCCATGGAGATGGAAGGATACTCCTGAACCAGTTGGTGGCTCTAAGGATTTTATGGCCTTTGG
GGGTGGTTTGCGGTTATGTGTTGGTGCTGAGTTTGCCAAGCTGCAAATGGCTATGTTCCTCCACTACTTGGTCACCAATT
ACAGATGGAAAGCCCTCAGCAAAGGGACGATGATGCTTTATCCCGGCCTGCGATTTCCGGACGGCTTTCACATCCAGCTT
CATAAGAAAACATGAAGGCTCCATTTGGAACGTGTAATTTTTTTTGTTCCTGTG




Most similar to sp|Q7XU38|C87A3_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7XU38|C87A3_ORYSJ Cytochrome P450 87A3 OS=Oryza sativa subsp.
           japonica GN=CYP87A3 PE=2 SV=3
          Length = 514

 Score =  221 bits (564), Expect = 2e-57
 Identities = 102/163 (62%), Positives = 121/163 (74%)
 Frame = +1

Query: 1   EHEKIMERRVDPDSDITWEEYKSMKFTSHVIHESLRLANIAPVVFRQANQDVHIKGYTIP 180
           EHE I+  R DP+S +TW EYKSM FTS VI E +RLANI P +FR+A QDV IKGYTIP
Sbjct: 351 EHEAIIRNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVPGIFRKALQDVEIKGYTIP 410

Query: 181 EGSKIMICPSAAHLNSKVYEDPLAFNPWRWKDTPEPVGGSKDFMAFGGGLRLCVGAEFAK 360
            G  IM+CP A HLN ++YEDPLAFNPWRW+  PE  GG+K FMAFGGGLR CVG + +K
Sbjct: 411 AGWGIMVCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGTKHFMAFGGGLRFCVGTDLSK 470

Query: 361 LQMAMFLHYLVTNYRWKALSKGTMMLYPGLRFPDGFHIQLHKK 489
           + MA F+H LVT Y W+ +  G ++  PGL FPDGFHIQL  K
Sbjct: 471 VLMATFIHSLVTKYSWRTVKGGNIVRTPGLSFPDGFHIQLFPK 513