miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|34446642|gb|CF433941.1|CF433941 ATTGATGAGCTCGACAAGCCAAACTCTATAATGAGCGAGAGCATCGCGTTGAACTTATTGTTCTTGCTCCTCTTTGCAAG
CCATGAAACGACGTCAATGGGGCTGACCGTGATACTCAAGTTTCTAACGGACAATCCAAAATCCTTGCAAGAATTGACCG
AGGAGCATGAAAAAATCATGGAAAGAAGGGTGGATCCAGACTCTGATATCACCTGGGAGGAGTACAAGTCTATGAAATTC
ACATCTCACGTCATACATGAATCTCTTAGGCTCGCAAACATCGCTCCGGTGGTGTTCAGACAAGCAAACCAGGACGTACA
CATAAAGGGATACACTATCCCAGAAGGATCAAAGATCATGATTTGTCCATCTGCAGCTCACCTGAATTCAAAGGTTTACG
AGGACCCCTTGGCATTCAATCCATGGAGATGGAAGGATACTCCTGAACCAGTTGGTGGCTCTAAGGATTTTATGGCCTTT
GGGGGTGGTTTGCGGTTATGTGTTGGTGCTGAGTTTGCCAAGCTGCAAATGGCTATGTTCCTCCACTACTTGGTCACCAA
TTACAGATGGAAAGCCCTCAGCAAAGGGACGATGATGCTTTATCCCGGCCTGCGATTTCCGGACGGCTTTCACATCCAGC
TTCATAAGAAAACATGAAGGCTCCATTTGGAACGTGTAATTTTTTTTGTTCCTGTGTTGTTTCTACAAAAAATAAAATAA
ATCCTAAAAAAACTATGGAATTCC




Most similar to sp|Q7XU38|C87A3_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7XU38|C87A3_ORYSJ Cytochrome P450 87A3 OS=Oryza sativa subsp.
           japonica GN=CYP87A3 PE=2 SV=3
          Length = 514

 Score =  258 bits (659), Expect = 3e-68
 Identities = 123/217 (56%), Positives = 153/217 (70%)
 Frame = +1

Query: 1   IDELDKPNSIMSESIAXXXXXXXXXASHETTSMGLTVILKFLTDNPKSLQELTEEHEKIM 180
           I EL +   +++E+IA         AS ETT++ LT+ +K LT+NPK +  L EEHE I+
Sbjct: 297 IQELRREKPLLTETIALDLMFVLLFASFETTALALTIGVKLLTENPKVVDALREEHEAII 356

Query: 181 ERRVDPDSDITWEEYKSMKFTSHVIHESLRLANIAPVVFRQANQDVHIKGYTIPEGSKIM 360
             R DP+S +TW EYKSM FTS VI E +RLANI P +FR+A QDV IKGYTIP G  IM
Sbjct: 357 RNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVPGIFRKALQDVEIKGYTIPAGWGIM 416

Query: 361 ICPSAAHLNSKVYEDPLAFNPWRWKDTPEPVGGSKDFMAFGGGLRLCVGAEFAKLQMAMF 540
           +CP A HLN ++YEDPLAFNPWRW+  PE  GG+K FMAFGGGLR CVG + +K+ MA F
Sbjct: 417 VCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGTKHFMAFGGGLRFCVGTDLSKVLMATF 476

Query: 541 LHYLVTNYRWKALSKGTMMLYPGLRFPDGFHIQLHKK 651
           +H LVT Y W+ +  G ++  PGL FPDGFHIQL  K
Sbjct: 477 IHSLVTKYSWRTVKGGNIVRTPGLSFPDGFHIQLFPK 513