| EST name | EST sequence |
| gi|42534316|gb|BX840233.1|BX840233 | AATAACTCTAGAAGCCCTTAAGCAACAACAGCTGATGAATGCTTATCCCTCACTATCTTCATCAGCTCCAGCTCTGCGCC AGGAATCGAACCCTAACCACTGCTAAAGCCCTCCATGCCCACATCGTCAAGCTCGGGATCGTTCAATGTTGCCCTTTGGC CAACACACTTGTCAATGTCTATGGCGCAAATGCGGCTGCTGCTTCTCATGCTCTCCAGGTGTTCGACGAAATGCCTCATA GAGATCACATCGCCTGGGCCTCGGTTCTCACAGCTCTTAATCAAGCCAATCTCTCTGGTAAGACACGGTCGGTATTTTGC TTCAGTGGCGTTCGAGCTCTGGGTTGCGCTCCTGATGATTTTGTGTTCTCGCGCTCTTGTTAAGCGCTTGCTGCTAACTT AGGATCTATTGATCACGGGAGGCAAGTTCATTGCCATTTTATAGTCTCTGAGTATGCTAATGATGAAGTTGTTAAGCTCT TCACTGGCTTGATATGTATGCTAAATGTGGATTGCTTAATAGTGCTAAAGCAGTTTTCGATTCTATAAGAGTGAAAAACA CCATTTCATGGACTGCAATGGTATCTGGATATGCTAAAAGCGGAAGAGAGGAAGAAGCTTTGGAGCTTTTTAGGATATTA CCAGTCAAGAATTTGTATTCTTGGACTGCGTTGATCTCTGGTTTTGTACAGAGTGGGAAAGGGCTTGAAGCTTTTTCTGT TTTCACTGAAATGAGGAGAGAAAGAGTTGACATTTTGGATCCTTTAGTTCTTTCGAGCATCGTTGGCGCTTGTGCTAATT TGGCAGCTTCTATAGCGGGGAGGCAGGTTCATGGGTTGGTTATAGCTCTAGGATTTGATTCTTGTTTTTTTATTAGTAAC GCCCTTATCGATATGTACGCTAAATGCAGCCATGTTATAGCTGCAAAGGATATTTTCAGTAGGATGCGTCACAAAGATGT AGTTTCATGGACA |
Most similar to sp|O23266|PP308_ARATH
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P25702|ACP3_ARATH Acyl carrier protein 3, chloroplastic
OS=Arabidopsis thaliana GN=ACL1.3 PE=1 SV=2
Length = 136
Score = 121 bits (303), Expect(2) = 6e-39
Identities = 64/70 (91%), Positives = 64/70 (91%)
Frame = +1
Query: 223 VYXXXKPETVDKVCXVVRKQLSLKEAXEITAATKFAALGXDSLDTVEIVMGLEEEFGIEM 402
VY KPETVDKVC VVRKQLSLKEA EITAATKFAALG DSLDTVEIVMGLEEEFGIEM
Sbjct: 50 VYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109
Query: 403 AEEKAQSIAT 432
AEEKAQSIAT
Sbjct: 110 AEEKAQSIAT 119
Score = 59.3 bits (142), Expect(2) = 6e-39
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 108 LQARPRQLVIGAKQVKSFSYGSRSNLSFN 194
LQARPRQLVIGAKQVKSFSYGSRSNLSFN
Sbjct: 12 LQARPRQLVIGAKQVKSFSYGSRSNLSFN 40
>sp|P25701|ACP2_ARATH Acyl carrier protein 2, chloroplastic
OS=Arabidopsis thaliana GN=ACL1.2 PE=1 SV=2
Length = 136
Score = 118 bits (295), Expect(2) = 4e-34
Identities = 62/65 (95%), Positives = 62/65 (95%)
Frame = +1
Query: 238 KPETVDKVCXVVRKQLSLKEAXEITAATKFAALGXDSLDTVEIVMGLEEEFGIEMAEEKA 417
KPETVDKVC VVRKQLSLKEA EITAATKFAALG DSLDTVEIVMGLEEEFGIEMAEEKA
Sbjct: 55 KPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKA 114
Query: 418 QSIAT 432
QSIAT
Sbjct: 115 QSIAT 119
Score = 46.2 bits (108), Expect(2) = 4e-34
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +3
Query: 108 LQARPRQLVIGAKQVKSFSYGSRSNLSFN 194
LQARPRQL I A QVKSFS G RS+LSFN
Sbjct: 12 LQARPRQLAIAASQVKSFSNGRRSSLSFN 40
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O23266|PP308_ARATH Pentatricopeptide repeat_field-containing protein
At4g14050, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-H13 PE=2 SV=3
Length = 612
Score = 310 bits (794), Expect(2) = e-149
Identities = 157/162 (96%), Positives = 160/162 (98%)
Frame = +2
Query: 488 LDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGREEEALELFRILPVKNLYSWT 667
+DMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR+EEALELFRILPVKNLYSWT
Sbjct: 147 VDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWT 206
Query: 668 ALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIA 847
ALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIA
Sbjct: 207 ALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIA 266
Query: 848 LGFDSCFFISNALIDMYAKCSHVIAAKDIFSRMRHKDVVSWT 973
LGFDSC FISNALIDMYAKCS VIAAKDIFSRMRH+DVVSWT
Sbjct: 267 LGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Score = 240 bits (612), Expect(2) = e-149
Identities = 126/146 (86%), Positives = 127/146 (86%)
Frame = +3
Query: 39 MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGANAAAASHALQ 218
MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYG AASHALQ
Sbjct: 1 MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYG-KCGAASHALQ 59
Query: 219 VFDEMPHRDHIAWASVLTALNQANLSGKTRSVFCFSGVRALGCAPDDFVFSRSC*ALAAN 398
VFDEMPHRDHIAWASVLTALNQANLSGKT SVF G + G PDDFVFS A AN
Sbjct: 60 VFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVG-SSSGLRPDDFVFSALVKA-CAN 117
Query: 399 LGSIDHGRQVHCHFIVSEYANDEVVK 476
LGSIDHGRQVHCHFIVSEYANDEVVK
Sbjct: 118 LGSIDHGRQVHCHFIVSEYANDEVVK 143
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat_field-containing protein
At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 126 bits (317), Expect(2) = 8e-33
Identities = 65/161 (40%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
Frame = +2
Query: 491 DMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGREEEALELFRILPVKNLYSWTA 670
DMY KC L SA+ VFD R K+ SWT+ +SGYA SG EA ELF ++P +N+ SW A
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 671 LISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 850
++ G+V + + EA T MR+E ++ +D + L I+ C+ ++ G+Q HG +
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQE-IENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRH 424
Query: 851 GFDSCFFISNALIDMYAKCSHVIAAKDIFSRMRH-KDVVSW 970
G+D+ ++NAL+DMY KC + +A F +M +D VSW
Sbjct: 425 GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Score = 35.8 bits (81), Expect(2) = 8e-33
Identities = 32/136 (23%), Positives = 59/136 (43%)
Frame = +3
Query: 66 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGANAAAASHALQVFDEMPHRD 245
L+ C L + LH +VK G L ++V+VYG S A +VFDE+ +
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYG-KCRVMSDARRVFDEIVNPS 227
Query: 246 HIAWASVLTALNQANLSGKTRSVFCFSGVRALGCAPDDFVFSRSC*ALAANLGSIDHGRQ 425
++W ++ + + + +V F + L P + S A + +L +++ G+
Sbjct: 228 DVSWNVIVRRYLEMGFNDE--AVVMFFKMLELNVRPLNHTVSSVMLACSRSL-ALEVGKV 284
Query: 426 VHCHFIVSEYANDEVV 473
+H + D VV
Sbjct: 285 IHAIAVKLSVVADTVV 300
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat_field-containing protein
At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 114 bits (285), Expect(2) = 2e-32
Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 13/175 (7%)
Frame = +2
Query: 488 LDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGREEEALELFRILPVK----NL 655
+DMYAKCG+++ A VF ++ VK+ +SW AMV+GY++ GR E+A+ LF + + ++
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 656 YSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG 835
+W+A ISG+ Q G G EA V +M + + + L S++ CA++ A + G+++H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIK-PNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 836 LVIAL-------GFDSCFFISNALIDMYAKCSHVIAAKDIFSRM--RHKDVVSWT 973
I G + N LIDMYAKC V A+ +F + + +DVV+WT
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Score = 46.6 bits (109), Expect(2) = 2e-32
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Frame = +3
Query: 75 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGANAAAASHALQVFDEMPHRDHIA 254
C ++ ++ HA + G + + N LV +Y + + S A +VFDEM D ++
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMY-SRCRSLSDARKVFDEMSVWDVVS 195
Query: 255 WASVLTALNQANLSGKTRSVFCFSGV-RALGCAPDDFVFSRSC*ALAANLGSIDHGRQVH 431
W S++ + A L ++ FS + GC PD+ A+LG+ G+Q+H
Sbjct: 196 WNSIIE--SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL-PPCASLGTHSLGKQLH 252
Query: 432 CHFIVSE 452
C + SE
Sbjct: 253 CFAVTSE 259
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat_field-containing protein
At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1
Length = 697
Score = 117 bits (293), Expect(2) = 1e-31
Identities = 64/168 (38%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
Frame = +2
Query: 485 WLDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGREEEALELFRILPVKNLYSW 664
++DMYAKC + A+ +FDS+ ++N I+ T+M+SGYA + + A +F + +N+ SW
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 665 TALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVI 844
ALI+G+ Q+G+ EA S+F ++RE V ++I+ ACA+LA G Q H V+
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESV-CPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 845 ALGF------DSCFFISNALIDMYAKCSHVIAAKDIFSRMRHKDVVSW 970
GF + F+ N+LIDMY KC V +F +M +D VSW
Sbjct: 414 KHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Score = 40.8 bits (94), Expect(2) = 1e-31
Identities = 30/136 (22%), Positives = 64/136 (47%)
Frame = +3
Query: 66 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGANAAAASHALQVFDEMPHRD 245
L C+ + +H+ I K + + + LV++Y + + A +VFDEM R+
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY-SKCGNVNDAQRVFDEMGDRN 217
Query: 246 HIAWASVLTALNQANLSGKTRSVFCFSGVRALGCAPDDFVFSRSC*ALAANLGSIDHGRQ 425
++W S++T Q + + V F + PD+ + S + A+L +I G++
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDV--FQMMLESRVEPDEVTLA-SVISACASLSAIKVGQE 274
Query: 426 VHCHFIVSEYANDEVV 473
VH + ++ ++++
Sbjct: 275 VHGRVVKNDKLRNDII 290
Score = 115 bits (288), Expect = 5e-25
Identities = 59/161 (36%), Positives = 94/161 (58%)
Frame = +2
Query: 488 LDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGREEEALELFRILPVKNLYSWT 667
+D Y+KCG L + VFD + +N +W ++V+G K G +EA LFR +P ++ +W
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 668 ALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIA 847
+++SGF Q + EA F M +E +L+ +S++ AC+ L G QVH L+
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGF-VLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 848 LGFDSCFFISNALIDMYAKCSHVIAAKDIFSRMRHKDVVSW 970
F S +I +AL+DMY+KC +V A+ +F M ++VVSW
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221