miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|45965651|gb|CN134264.1|CN134264 CCGCCATGGTCCCAGCCTACGACAAGACCAAGTACACCGGCATTGGGTCTGCCATTGAGTACGCCGTGTGCGCCCTCAAG
GTGCAGGTCCTCGTCGTCATTGGCCACAGCTGCTGTGGTGGCATCAGGGCGCTCCTCTCCCTCCAGGATGGCGCACCTGA
CACCTTCCACTTCGTTGAGGACTGGGTCAGGATCGGCTTCCCTGCCAAGATCAAGGTGAAGAAAGAGCACGCTTCGGTGC
CGTTCGATGACCAGTGTTCCATCCTGGAGAAGGAGGCCGTGAACGTGTCCCTCGACAACCTCAAGACGTACCCCTTCGTC
AAGGAAGGGCTGGCCAACGGGACCCTCAGGCTGGTCGGCGGCCACTACAACTTCGTGTCAGGGGAGTTCGACACATGGGA
AATTAAGAGCTAAGCTGCCCGGCCGGCCGCTTAACAACTCCTACCATCATCATAAATATATATACTACATACCTACCGAT
ATGCACCCGATCGATGTGAATGCGTGGAGTATTACTCATGTTTTCTGCATGCAGCGACATATATATATATATACCGGATC
GCCCAATGTGAATGTAATAAGTAATAGCATTTTCTACCGCTTTTATTTCTAACGCCGAGCTTTCATGTACTATATAATGT
GTTATATGATGAGTAATTTGACCGCCCTGTGGTCAAAAGACATCAGCTATAATCCTTTTTTCGCAATATTTATTATGAAG
CGTTTCCT




Most similar to sp|P40880|CAHC_HORVU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum
           vulgare PE=2 SV=1
          Length = 324

 Score =  225 bits (574), Expect = 2e-58
 Identities = 106/132 (80%), Positives = 121/132 (91%)
 Frame = +3

Query: 6   MVPAYDKTKYTGIGSAIEYAVCALKVQVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDW 185
           MVPAY K KY G+GSAIEYAVCALKV+V+VVIGHS CGGI+ALLSL+DGA D+FHFVEDW
Sbjct: 192 MVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDW 251

Query: 186 VRIGFPAKIKVKKEHASVPFDDQCSILEKEAVNVSLDNLKTYPFVKEGLANGTLRLVGGH 365
           VRIGFPAK KV+ E AS+PFDDQC++LEKEAVNVSL NL TYPFVKEG+ NGTL+LVGGH
Sbjct: 252 VRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGH 311

Query: 366 YNFVSGEFDTWE 401
           Y+FVSG+F+TWE
Sbjct: 312 YDFVSGKFETWE 323