miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|45987600|gb|CN147194.1|CN147194 CCAAGTACACCGGCATTGGGTCTGCCATTGAGTACGCCGTGTGCGCCCTCAAGGTGCAGGTCCTCGTCGTCATTGGCCAC
AGCTGCTGTGGTGGCATCAGGGCGCTCCTCTCCCTCCAGGATGGCGCACCTGACACCTTCCACTTCGTTGAGGACTGGGT
CAGGATCGGCTTCCCTGCCAAGATCAAGGTGAAGAAAGAGCACGCTTCGGTGCCGTTCGATGACCAGTGTTCCACCCTGG
AGAAGGAGGCCGTGAACGTGTCCCTCGACAACCTCAAGACGTACCCCTTCGTCAAGGAAGGGCTGGCCAACGGGACCCTC
AGGCTGGTCGGCGGCCACTACAACTTCGTGTCAGGGGAGTTCGACACATGGGAAATTAAGAGCTAAGCTGCCCGGCCGGC
CGCTTAACAACTCCTACCATCATCATAAATATATATACTACATACCTACCGATATGCACCCGATCGATGTGAATGCGTGG
AGTATTACTCATGTTTTCTGCATGCAGCGACATATATATATATATACCGGATCGCCCAATGTGAATGTAATAAGTAATAG
CATTTTCTACCGCTTTTATTTCTAACGCCGAGCTTTCATGTACTATATAATGTGTTATATGATGAGTAATTTGACCGCCC
TGTGGTCAAAAGACATCAGCTATAATCCTTTTTTCGCAATATTTATTATGAAGCGTTTACCTCTGT




Most similar to sp|P40880|CAHC_HORVU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum
           vulgare PE=2 SV=1
          Length = 324

 Score =  213 bits (542), Expect = 1e-54
 Identities = 100/124 (80%), Positives = 114/124 (91%)
 Frame = +3

Query: 3   KYTGIGSAIEYAVCALKVQVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDWVRIGFPAK 182
           KY G+GSAIEYAVCALKV+V+VVIGHS CGGI+ALLSL+DGA D+FHFVEDWVRIGFPAK
Sbjct: 200 KYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAK 259

Query: 183 IKVKKEHASVPFDDQCSTLEKEAVNVSLDNLKTYPFVKEGLANGTLRLVGGHYNFVSGEF 362
            KV+ E AS+PFDDQC+ LEKEAVNVSL NL TYPFVKEG+ NGTL+LVGGHY+FVSG+F
Sbjct: 260 KKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKF 319

Query: 363 DTWE 374
           +TWE
Sbjct: 320 ETWE 323