miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|46031701|gb|BP683746.1|BP683746 AACCACTGTAACTGTATCATAGACCAAATCTTCACAGGAGGCCTACAGTCAGATGTAACTTGTCAAGTGTGCCATGGGGT
CTCTACGACTATAGATCCATTTTGGGACATCAGCTTAGATCTGCCAGGCTCTTCAACTCCATTCTGGCCTCTTAGCCCAG
GAAGTGATGCTGGTGTTGTGAATGGGGAGAGTCATGTGTCAGGAACAACAACGCTCACAGACTGCCTCCGGAGGTTTACA
CGACCAGAGCATCTAGGAAGTAGTGCCAAAATTAAATGCAGTGGTTGCCATAGCTACCAGGAATCTACTAAACAGCTGAC
TATGAAGAAATTGCCTATTGTGGCTTGTTTTCATCTCAAACGATTTGAGCATTCGGCTAAACTGAGGCGGAAGATTACAA
CATATGTGTCATTCCCTTTGGAGCTGGACATGACGCCATTTATGGCCTCCAGTAAAGAAAGCCGAATGAATGGACAGTAT
CAGCAACCATCTGATAGTTTACACAATGACAATAAGTATTCCTTGTTTGCAGTAGTTAATCACCAGGGAACCTTGGAGAG
TGGGCATTACACAAGCTTCATCAGGCAACACAAGGACCAGTGGTTCAAATGTGATGATGCGATTATTACCAAGGCTAGCA
TTAAAGATGTTCTAGATAGTGAAGGGTATTTGCTTTTCTATCACAAGCAGTTTCTGGAGTATGAGTAACTTTTATCAGAG
TTTTTCTGAATTACCTGTATAGAATGATATCAA




Most similar to sp|Q6GNI6|UB22A_XENLA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6GNI6|UB22A_XENLA Ubiquitin carboxyl-terminal hydrolase 22-A
           OS=Xenopus laevis GN=usp22-a PE=2 SV=1
          Length = 523

 Score =  484 bits (1246), Expect = e-136
 Identities = 230/230 (100%), Positives = 230/230 (100%)
 Frame = +1

Query: 1   NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVV 180
           NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVV
Sbjct: 289 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVV 348

Query: 181 NGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLK 360
           NGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLK
Sbjct: 349 NGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLK 408

Query: 361 RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVN 540
           RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVN
Sbjct: 409 RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVN 468

Query: 541 HQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQ 690
           HQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQ
Sbjct: 469 HQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQ 518