miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|46288543|gb|BX359042.2|BX359042 GCCGTCGCCGCCACCCGAGCCGGAGCGNGCTGGGCGCCAAGGCAAGATGGTGGACTACAGCGTGTGGGACCACATTGAGG
TGTCTGATGATGAAGACGAGACGCACCCCAACATCGACACGGCCAGTCTCTTCCGCTGGCGGCATCAGGCCCGGGTGGAA
CGCATGGAGCAGTTCCAGAAGGAGAAGGAGGAACTGGACAGGGGCTGCCGCGAGTGCAAGCGCAAGGTGGCCGAGTGCCA
GAGGAAACTGAAGGAGCTGGAGGTGGCCGAGGGCGGCAAGGCAGAGCTGGAGCGCCTGCAGGCCGAGGCACAGCAGCTGC
GCAAGGAGGAGCGGACTGGGAGCAGAAGCTGGAGGAGATGCGCAAGAAGGAGAAGAGCATGCTCTGGAACGTGGACACGC
TCAGCAAAGACGGCTTCAGCAAGAGCATGGTAAATACCAAGCCCGAGAAGACGGAGGAGGACTCAGAGGAGGTGAGGGAG
CAGAAACACAAGACCTTCGTGGAAAAATACGAGATACAGATCAAGCACTTTGGCATGCTTCGCCGCTGGGATGACAGCCA
AAAGTACCTGTCAGACAACGTCCACCTGGTGTGCGATGAGACAGCAATTACTGGTCATTTGGTGCATTGACTAGAGGTGG
AGGAGATATGTGCACTCATGGAGCAGGTGGCCACAGACAATCGTCATGCTATTTATCTGGAGCTGNCNANNAGCTNAANG
TGNACCCCGGGNCTGCTTCTGGCAGTNCTTCACTAAGATNAGACAGCGATCGCCNATNCATNGTAGGCTTCNACGNCGAC
TGGNAGCNTTCTANGNACGTGTGCGNGNCGTGCNAGCTGCGCNTCGANNAGNCNTGNAGNATNCGAGNGNAGNACGCNAN
AGCGNCTCGNCCCGNCGNCTGNNCCCGTCGNAGTCTNGNATNCTTCC




Most similar to sp|Q16543|CDC37_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q16543|CDC37_HUMAN Hsp90 co-chaperone Cdc37 OS=Homo sapiens
           GN=CDC37 PE=1 SV=1
          Length = 378

 Score =  197 bits (500), Expect(2) = e-102
 Identities = 95/95 (100%), Positives = 95/95 (100%)
 Frame = +2

Query: 47  MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 226
           MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK
Sbjct: 1   MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60

Query: 227 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEE 331
           VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEE
Sbjct: 61  VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEE 95



 Score =  196 bits (498), Expect(2) = e-102
 Identities = 102/115 (88%), Positives = 104/115 (90%), Gaps = 3/115 (2%)
 Frame = +1

Query: 337 WEQKLEEMRKKEKSMLWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEI 516
           WEQKLEEMRKKEKSM WNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYE 
Sbjct: 98  WEQKLEEMRKKEKSMPWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEK 157

Query: 517 QIKHFGMLRRWDDSQKYLSDNVHLVCDETAITGHLV---H*LEVEEICALMEQVA 672
           QIKHFGMLRRWDDSQKYLSDNVHLVC+ETA   +LV     LEVEE CALMEQVA
Sbjct: 158 QIKHFGMLRRWDDSQKYLSDNVHLVCEETA--NYLVIWCIDLEVEEKCALMEQVA 210


           GN=Cdc37 PE=1 SV=2
          Length = 379

 Score =  188 bits (478), Expect(2) = 7e-97
 Identities = 97/115 (84%), Positives = 101/115 (87%), Gaps = 3/115 (2%)
 Frame = +1

Query: 337 WEQKLEEMRKKEKSMLWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEI 516
           WEQKLE+MRKKEK+M WNVDTLSKDGFSKSMVNTKPEK EEDSEE REQKHKTFVEKYE 
Sbjct: 99  WEQKLEDMRKKEKNMPWNVDTLSKDGFSKSMVNTKPEKAEEDSEEAREQKHKTFVEKYEK 158

Query: 517 QIKHFGMLRRWDDSQKYLSDNVHLVCDETAITGHLV---H*LEVEEICALMEQVA 672
           QIKHFGML RWDDSQKYLSDNVHLVC+ETA   +LV     LEVEE CALMEQVA
Sbjct: 159 QIKHFGMLHRWDDSQKYLSDNVHLVCEETA--NYLVIWCIDLEVEEKCALMEQVA 211



 Score =  187 bits (476), Expect(2) = 7e-97
 Identities = 92/96 (95%), Positives = 94/96 (97%), Gaps = 1/96 (1%)
 Frame = +2

Query: 47  MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 226
           MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK
Sbjct: 1   MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60

Query: 227 VAECQRKLKELEVAE-GGKAELERLQAEAQQLRKEE 331
           VAECQRKLKELEVAE GG+ ELERL+AEAQQLRKEE
Sbjct: 61  VAECQRKLKELEVAEGGGQVELERLRAEAQQLRKEE 96


>sp|Q61081|CDC37_MOUSE Hsp90 co-chaperone Cdc37 OS=Mus musculus
           GN=Cdc37 PE=2 SV=1
          Length = 379

 Score =  188 bits (478), Expect(2) = 3e-96
 Identities = 97/115 (84%), Positives = 101/115 (87%), Gaps = 3/115 (2%)
 Frame = +1

Query: 337 WEQKLEEMRKKEKSMLWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEI 516
           WEQKLE+MRKKEK+M WNVDTLSKDGFSKSMVNTKPEK EEDSEE REQKHKTFVEKYE 
Sbjct: 99  WEQKLEDMRKKEKNMPWNVDTLSKDGFSKSMVNTKPEKAEEDSEEAREQKHKTFVEKYEK 158

Query: 517 QIKHFGMLRRWDDSQKYLSDNVHLVCDETAITGHLV---H*LEVEEICALMEQVA 672
           QIKHFGML RWDDSQKYLSDNVHLVC+ETA   +LV     LEVEE CALMEQVA
Sbjct: 159 QIKHFGMLHRWDDSQKYLSDNVHLVCEETA--NYLVIWCIDLEVEEKCALMEQVA 211



 Score =  185 bits (470), Expect(2) = 3e-96
 Identities = 91/96 (94%), Positives = 93/96 (96%), Gaps = 1/96 (1%)
 Frame = +2

Query: 47  MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 226
           MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK
Sbjct: 1   MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60

Query: 227 VAECQRKLKELEVAEG-GKAELERLQAEAQQLRKEE 331
           VAECQRKLKELEVAE  G+ ELERL+AEAQQLRKEE
Sbjct: 61  VAECQRKLKELEVAESDGQVELERLRAEAQQLRKEE 96


>sp|O57476|CDC37_CHICK Hsp90 co-chaperone Cdc37 OS=Gallus gallus
           GN=CDC37 PE=2 SV=1
          Length = 393

 Score =  179 bits (455), Expect(2) = 2e-84
 Identities = 88/101 (87%), Positives = 92/101 (91%), Gaps = 6/101 (5%)
 Frame = +2

Query: 47  MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 226
           MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELD+GCRECKRK
Sbjct: 1   MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDKGCRECKRK 60

Query: 227 VAECQRKLKELEVAE------GGKAELERLQAEAQQLRKEE 331
           +AECQ+KLKELEVAE      GG+ E ERLQAEAQQLR EE
Sbjct: 61  LAECQKKLKELEVAEPGGGSGGGRGERERLQAEAQQLRHEE 101



 Score =  155 bits (391), Expect(2) = 2e-84
 Identities = 83/116 (71%), Positives = 95/116 (81%), Gaps = 3/116 (2%)
 Frame = +1

Query: 334 DWEQKLEEMRKKEKSMLWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYE 513
           +WE K+EE+RKKEK+M WNV TLSKDGFSKS+ N K E+ EE +EE +EQKHKTFVE++E
Sbjct: 103 NWESKMEELRKKEKNMPWNVHTLSKDGFSKSVFNVKAEEKEE-TEEQKEQKHKTFVERHE 161

Query: 514 IQIKHFGMLRRWDDSQKYLSDNVHLVCDETAITGHLV---H*LEVEEICALMEQVA 672
            QIKHFGMLRRWDDSQKYLSDN HLVC+ETA   +LV     LEVEE  ALMEQVA
Sbjct: 162 KQIKHFGMLRRWDDSQKYLSDNPHLVCEETA--NYLVIWCIDLEVEEKQALMEQVA 215


>sp|Q9DGQ7|CDC37_TETFL Hsp90 co-chaperone Cdc37 OS=Tetraodon
           fluviatilis GN=cdc37 PE=3 SV=1
          Length = 377

 Score =  145 bits (367), Expect(2) = 4e-68
 Identities = 79/116 (68%), Positives = 90/116 (77%), Gaps = 3/116 (2%)
 Frame = +1

Query: 334 DWEQKLEEMRKKEKSMLWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYE 513
           DW +KLEE   +EK M WNVDTLSKDGFSKS+VN K +  E D+EE +E+KHKTFVE+YE
Sbjct: 101 DWARKLEEHNHEEKKMPWNVDTLSKDGFSKSIVNVKADSAE-DTEEEKEKKHKTFVERYE 159

Query: 514 IQIKHFGMLRRWDDSQKYLSDNVHLVCDETAITGHLV---H*LEVEEICALMEQVA 672
            QIKHFGML RWDDSQ+YLSDN  LVC+ETA   +LV     LEVEE  ALMEQVA
Sbjct: 160 KQIKHFGMLHRWDDSQRYLSDNPDLVCEETA--NYLVIMCIDLEVEEKHALMEQVA 213



 Score =  134 bits (338), Expect(2) = 4e-68
 Identities = 61/96 (63%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +2

Query: 50  VDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRKV 229
           +DYSVWDHIEVSDDED +HPNIDT SLFRWRHQARVERME F+K+ ++L++G +EC+RK+
Sbjct: 4   IDYSVWDHIEVSDDEDVSHPNIDTPSLFRWRHQARVERMEDFKKKGDDLNKGLQECRRKL 63

Query: 230 AECQRKLKELEVAEGG--KAELERLQAEAQQLRKEE 331
           AE Q+K++EL ++  G  KAEL + Q E ++L+KEE
Sbjct: 64  AEAQKKVRELSISAAGDAKAELTKTQTEEKKLKKEE 99


>sp|Q5EAC6|CDC37_BOVIN Hsp90 co-chaperone Cdc37 OS=Bos taurus
           GN=CDC37 PE=2 SV=1
          Length = 380

 Score =  193 bits (490), Expect = 2e-48
 Identities = 110/170 (64%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
 Frame = +1

Query: 172 VPEGEGGTGQGLPRVQAQGGRVPEETEXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEQKL 351
           V EGEGG  + L R+QA+  ++ +E                              WEQKL
Sbjct: 73  VAEGEGGKAE-LERLQAEAQQLRKEER---------------------------SWEQKL 104

Query: 352 EEMRKKEKSMLWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEIQIKHF 531
           EEMRKKEKSM WNVDTLSKDGFSKSMVNTKPE+ EE+SEEVREQKHKTFVEKYE QIKHF
Sbjct: 105 EEMRKKEKSMPWNVDTLSKDGFSKSMVNTKPEQAEEESEEVREQKHKTFVEKYEKQIKHF 164

Query: 532 GMLRRWDDSQKYLSDNVHLVCDETAITGHLV---H*LEVEEICALMEQVA 672
           GMLRRWDDSQKYLSDNVHLVC+ETA   +LV     LEVEE CALMEQVA
Sbjct: 165 GMLRRWDDSQKYLSDNVHLVCEETA--NYLVIWCIDLEVEEKCALMEQVA 212



 Score =  192 bits (487), Expect = 4e-48
 Identities = 95/97 (97%), Positives = 95/97 (97%), Gaps = 2/97 (2%)
 Frame = +2

Query: 47  MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 226
           MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK
Sbjct: 1   MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60

Query: 227 VAECQRKLKELEVA--EGGKAELERLQAEAQQLRKEE 331
           VAECQRKLKELEVA  EGGKAELERLQAEAQQLRKEE
Sbjct: 61  VAECQRKLKELEVAEGEGGKAELERLQAEAQQLRKEE 97