miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|46557597|gb|BX380505.2|BX380505 TTTTTCACATGACCTTAAGANGTGGAGATGGGGTACATTAAAACCATGAGATAGTGCAGGGAACAGCCGTNGGCCTGTTT
GCACCTTCGGGTATTGCTGCGCCCAAAGGTTCGGGCCCCCGGGGGGGGCGGAAGTGAGAAAGGGTGAGTGCAGCGAGGGG
AGCCTCCTGCTAGGGGGCTGGGGTCCCCGGTCCAGGGGGGGGTGTGGGCTTGGCCTTGGGGTGCGGGGCAGGGGCGTGGG
CCCCTCCTCCCCCCTTCTTGGGCGCTGGGGGGCTTCTGGGTCCGCGGGGGGGGCCCCTCAGGCGCGGGGCGGCCTCTGGA
GGTCTCTCTTTGCCCTTCGGTCCTGGAGGGGCCTTGCTTGGAGGCAAAGCGTCCTCCACTCTGTCCTCAGGACTCAGCTG
TGTGGCCTTGGATTTCTTTTTGCGGGACTTGCGCCCTTTGGGTGCCAACGGTCCAGGATCCCCCTGGACCAGATGGTACG
GCCATGCCGGTCCTGCAGGGAGCTCATGCCTGGCATGCCATAGCAGCGCACAGGCTCGAAAGGCAGCGAAGTCCTCCTCC
CCGCTCTCTGACCCGTAGCCTTTGCCCCCTGTGGGACAGAGGAACAGGCAGAGATCAGAGGGCAGGCTCAGGTTGGGAGG
AGTGGGGAGCCTGGTTAGACCTGGCCCAGACCTCAGCTACACAAGCTGATGGACTGAGTCAGGGGCCACACTCTCCCTCC
TCTGGTGATGTGACCTCAGCTGGTTTCTTCCCACTCGGCCATGGGTTTCCCATCCTGGAGTGGGATTAAGAATCCTTGTC
CTGGCCCTGTGCAGTGGCCACACCTGTAATCCCGACACTTTGGGAAGCTTAGATGGGAGAATCCCTAGGGGCCAGGAGTT
CAATACCAGCCTGGGCAACATAGGGAGACCTGTCTCTACAAAAAAATTTTACAATTAGCCGGTGTGGTGGTGTGAGCTGC
AGTCCAGCTACTTAGAGCAGATGTGGGAGGATATTGAGCCAGTTAGGCTAGTCAGGCAATGGCGGATCCATCTCTCAAAA
TATTAACGTGCGTTTGTGTTTTTTTTTTTTTTTTTTTTTATTATAAAATCTTTCCTTTTCGGCGCTTGAGAATTTTTTTT
TTTTTTT




Most similar to sp|Q96FI4|NEIL1_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q96FI4|NEIL1_HUMAN Endonuclease 8-like 1 OS=Homo sapiens
           GN=NEIL1 PE=1 SV=3
          Length = 390

 Score =  139 bits (350), Expect = 4e-32
 Identities = 75/124 (60%), Positives = 75/124 (60%)
 Frame = -3

Query: 567 RCYGMPGMSSLQDRHGRTIWXQGDPGPLAPXXXXXXXXXXKATQLSPEDRVEDALPPSKA 388
           RCYGMPGMSSLQDRHGRTIW QGDPGPLAP          KATQLSPEDRVEDALPPSKA
Sbjct: 261 RCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKSKATQLSPEDRVEDALPPSKA 320

Query: 387 PXXXXXXXXXXXXRXAXXRPEGPXPXXDPEAPXAPKKGRRXGPXXAPXXRXPXKAXAHTP 208
           P            R A  RPEG     DPEAP  PKKGRR G   A     P K  A  P
Sbjct: 321 PSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRRKGRQAASGHCRPRKVKADIP 380

Query: 207 PLXP 196
            L P
Sbjct: 381 SLEP 384