miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|4768015|gb|AI664432.1|AI664432 CTGCGCTCTCGCTGGACAAGTGAGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGTGGTAACTCTGCAGGG
ACGGCCTCAGGATGCAGAACGACGCCGGCGAGTTTGTGGACCTGTACGTGCCGCGGAAATGCTCCGCAAGCAACCGCATC
ATTGCTGCCAAGGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGATAGGACCACAGGCCGGTTTAATGGCCAGTT
TAAAACCTATGGCATCTGCGGGGCCATTCGCAGGATGGGCGAGTCAGATGATTCTATTCTCCGATTGGCTAAGGCTGATG
GAATTGTCTCAAAGAACTTTTGAGCAGAAGAAATCGGGAATTTGTTACAAATAAAAGTTTTAAGTACCTGTG




Most similar to sp|Q9CQR2|RS21_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9CQR2|RS21_MOUSE 40S ribosomal protein S21 OS=Mus musculus
           GN=Rps21 PE=2 SV=1
          Length = 83

 Score =  168 bits (425), Expect = 1e-41
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = +2

Query: 92  MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 271
           MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 60

Query: 272 RMGESDDSILRLAKADGIVSKNF 340
           RMGESDDSILRLAKADGIVSKNF
Sbjct: 61  RMGESDDSILRLAKADGIVSKNF 83