miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|51996741|gb|CV186196.1|CV186196 ATCAGACAGCTGGTACATCAAGCCAGAGTCCCCTCACTACCAGTCCATCACTGTAAATTCCACTGCTGGTTTTGATGAGG
AAAGCTTTGGGTCATTTGTAACCACAATGGTGAACATGCGGCGGGAAGGTGCTTCCCTTTGGACTCGTATATCTCTGGAG
TATGAACTGGTGGCACACTTCTATCAGATGAATAAACAGGTGATTGAGATGGTAGAGGAAATGTTTGAGAATACCGAACT
GATGCAGAGCCTCCGCAATGCCAAATATGATTTGGTACTAACAGACCCTGGAATTGGTGCAGGGGTGCTTCTGGGTCACC
GTTTGGGTCTTCCACTTGTCTTGAATGTGAGGTGGACTATTCAGGGTGAGGGGCATCACGCAATTGCACCTACCCCATTG
TCGTATGTCCCAATTCCAATGACAGAGCTGACCGACAAGATGACATTTCCCCAGCGGGTCAAGAATATCCTTTACTATAT
CTTCACTCGTATCCAAATTTGGTACATAACAGACCCAAACTACAAACCATTTGTCCATCGTTACTTTGGAAATGATGTAC
ATTATATGGAGCTGTTCCAGTCAGCAGACATCTGGCTGATGAGGAATGATTTTACCTTTGAGTTTCCACGACCCACAATG
CCAAACATCGTCTATATGTCAGGATTTCAGTGCAAACCCTCAAAGCCCCTCTCTAAAGAACTAGAGGACTTTGTCCAGAG
TTCTGGTGAACACGGGTATCATTGTGATGACATTTGGGAACCCCTGGGTGGGCAAAAACTTCCCTGAAGGACATTGCTGA
AAGAANANTTGCCGCTGCCTTTTTGCCCCAACTTTCCTCCAAAAAGGNGANTCTTGGAAGGTTACAAAAGGAAAAAANNA
ACCNNTCCACCCCNTCCGGCAAACCAACNNCNTTTACTTNTTTGNAACTNGGGCCTGCCCTNNCAAAAATGGAACCTTCC
NGGGGGNTCNCCCCCAAAGAAACCAAANANTGGTTTTNNGGGNCNTCCCTGGGGANGGCCCCCCAANNNGGNANTATCNG
GGAAGGCCCCNTCTCTCCCNGNNGGGGGNTNCCCCCCTTTGGNNGGNCCTTACCCCTTNAAATGGTTTTNNAACCCANTA
GGGAAAAAACTTTCTTTNCAGNAATAAAAANTCAAGGAGGGGGNGGGNCCNAAAGTTCCNTGGNAANNTCCCCA




Most similar to sp|Q6PDD0|UD2A2_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6PDD0|UD2A2_MOUSE UDP-glucuronosyltransferase 2A2 OS=Mus
           musculus GN=Ugt2a2 PE=2 SV=1
          Length = 528

 Score =  133 bits (335), Expect = 2e-30
 Identities = 78/236 (33%), Positives = 121/236 (51%), Gaps = 2/236 (0%)
 Frame = +2

Query: 35  HYQSITVNSTAGFDEESFGSFVTTMVNMRREGASLWTRISLEYELVAHFYQMNKQVIEMV 214
           +++ I V+ T    +E     +   ++ R    ++WT       L+A FY  NKQ   M 
Sbjct: 71  NFEEIPVSYTKSKIDEIIEHMIALWLDHRPTPLTMWTFYKELGNLLATFYTTNKQ---MC 127

Query: 215 EEMFENTELMQSLRNAKYDLVLTDPGIGAXXXXXXXXXXXXXXNVRWT--IQGEGHHAIA 388
           + +  N  +M+ L+   +D++L DP                   +R++     E H    
Sbjct: 128 DGVLNNPTVMERLQKGGFDVLLADPVTMCGELVALKLGIPFVYTLRFSPAFTVERHCGKI 187

Query: 389 PTPLSYVPIPMTELTDKMTFPQRVKNILYYIFTRIQIWYITDPNYKPFVHRYFGNDVHYM 568
           P P+SYVP  ++ELTD+M+F +RVKNI+ Y   +  I+      +  +  +  G      
Sbjct: 188 PAPISYVPAALSELTDQMSFGERVKNIISYSL-QDYIFKTYWGEWNSYYSKVLGRPTTLC 246

Query: 569 ELFQSADIWLMRNDFTFEFPRPTMPNIVYMSGFQCKPSKPLSKELEDFVQSSGEHG 736
           E    A+IWLMR  + FEFPRP +PN  ++ G  CKP+KPL KE+E+FVQ+SGEHG
Sbjct: 247 ETMGKAEIWLMRTYWDFEFPRPYLPNFEFVGGLHCKPAKPLPKEMEEFVQTSGEHG 302