miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|52498229|gb|CV245254.1|CV245254 TTTTTTTTTTTTTTTTTTCTTGCAGCTAATTGAGGAAGAACATAGATAGATTATAAGTCTTGATCTTAAATCAGAGTGTT
CAAATTAAAGACATTCAGGTCCAAACTAGAGAGCACACACAGATAGCGAAGACCGCATATAGCATCATGAGCAATCAGCC
TTAGATTTGAGCAGAGTGACTGCTAATGATGTTATATCATTTTATGAAGCTCCTCGTGTGCTTAAACCTCCCACCAGAAG
ATTGTTCCGCCTATCGGAACCCCCCTCCAAGAGCGGGAGCCCAGTAGTATGCTCCATTATCGCTGCCAACTTGCAGTGTG
CATGACACTGGAACAAGACACAATCCTCTACTCCTCAGGTCCTTTGGCTCCCCGTGAGAGTCCTGCTGAGAAGCTCCTTT
CCTCTTTATGCAGCTATCATTCAACAGCTGACCGGGGTCCTCGGGAAATATACAGTTGCTTTCTCCC




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  109 bits (273), Expect = 6e-24
 Identities = 53/73 (72%), Positives = 61/73 (83%), Gaps = 6/73 (8%)
 Frame = -2

Query: 466 GESNCIFPEDPGQLLNDSCIKRKGASQ-----QDSHGEPK-DLRSRGLCLVPVSCTLQVG 305
           G+ +CIFPEDPGQL+ND C+KR+GAS      Q++  EPK DLRSRGLCLVP+SCTLQVG
Sbjct: 330 GDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVG 389

Query: 304 SDNGAYYWAPALG 266
           SDNGA YWAPALG
Sbjct: 390 SDNGADYWAPALG 402