miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|52618975|gb|CR775726.1|CR775726 GGGGGGCGAAGGCCCGAGCGCGGCCCGGCGGGCGCGTGGTTTTTGTCAGGCGAAACGTACACGGCAGGTGTCCTGCGCCT
CCTCCTCCGTCACCTGCCGCAGGTACGCCCTCGCTGGGGCCTCCCTGTCCGCGGGGCGGGGCAGCGCGCCTTCCTCTTCC
TGGGCAGCCTCGGGACGGGGCGCCGCGGCCGGGCGGGCAGCATGAATAACCCTATACCTTCCAATTTGAAATCAGAAGCA
AAAAAGGCTGCCAAAATATTAAGAGAATTCACAGAAATAACTTCCAGAAATGGACCTGATAAGATCATTCCTGCTCACGT
AATTGCAAAGGCTAAAGGCCTTGCAATTCTGTCTGTGATCAAAGCCGGGTTCCTGGTGACTGCTAGAGGAGGCAGCGGGA
TTGTAGTGGCGCGCCTTCCAGATGGAAAGTGGTCTGCACCCTCAGCCATTGGGATAGCTGGCCTTGGTGGGGGATTTGAA
ATAGGAATTGAGGTATCAGACTTGGTGATAATT




Most similar to sp|Q5RAQ2|SH3Y1_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5RAQ2|SH3Y1_PONAB SH3 domain-containing YSC84-like protein 1
           OS=Pongo abelii GN=SH3YL1 PE=2 SV=1
          Length = 342

 Score =  165 bits (417), Expect = 2e-40
 Identities = 88/104 (84%), Positives = 88/104 (84%)
 Frame = +1

Query: 202 MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVT 381
           MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVT
Sbjct: 1   MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVT 60

Query: 382 ARGGSGIVVARLPDGKWSAPSXXXXXXXXXXXXXXXXVSDLVII 513
           ARGGSGIVVARLPDGKWSAPS                VSDLVII
Sbjct: 61  ARGGSGIVVARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVII 104