miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|56862157|gb|CX206865.1|CX206865 ACAACATCCGTCAGGAGATCAGCATCATGAACTGCCTCCACCACCCCAAGCTGGTCCAGTGTGTGGATGCCTTCGAAGAA
AAGGCCAACATTGTCATGGTTCTGGAGATCGTGTCCGGGGGTGAGCTGTTTGAGCGTATCATTGACGAGGACTTCGAGCT
GACGGAGCGGGAGTGTATCAAGTACATGAGGCAGATCTCGGAAGGGGTGGAGTACATCCACAAGCAGGGCATTGTGCACC
TGGACCTCAAGCCCGAGAACATCATGTGTGTCAACAAGACAGGCACCAGGATCAAGCTCATTGACTTCGGCCTGGCACGG
AGACTCGAGAACGCTGGGTCTCTGAAGGTCCTCTTTGGGACCCCAGAGTTTGTGGCTCCTGAAGTGATCAACTATGAGCC
CATCGGCTACGCCACAGACATGTGGAGCATCGGGGTCATCTGCTATATTCTGGTCAGCGGACTTTCTCCCTTCATGGGTG
ACAATGATAACGAGACCTTAGCCAACGTCACTTCAGCCACCTGGGACTTCGATGACGAGGCATTCGATGAGATCTCCGAT
GACGCAAAGGATTTCATCAGTAACTTGCTGAAGAAAGATATGAAGTAATAAGCAGGGATGGCAGTCTCGTCAGCCTCTGG
CTAGTCCTGGGGCGCAGGCCTTCCTGTATCTGTGAAGCTCCCCCTTCCTGGTCTTACACCAGTCCTGTGTTCCCTGAAAA
GAAAGGAGTGTCCAGTGAGGAC




Most similar to sp|Q6PDN3|MYLK_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle OS=Mus
            musculus GN=Mylk PE=1 SV=3
          Length = 1941

 Score =  408 bits (1048), Expect = e-113
 Identities = 201/201 (100%), Positives = 201/201 (100%)
 Frame = +3

Query: 3    NIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIK 182
            NIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIK
Sbjct: 1527 NIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIK 1586

Query: 183  YMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGT 362
            YMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGT
Sbjct: 1587 YMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGT 1646

Query: 363  PEFVAPEVINYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEA 542
            PEFVAPEVINYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEA
Sbjct: 1647 PEFVAPEVINYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEA 1706

Query: 543  FDEISDDAKDFISNLLKKDMK 605
            FDEISDDAKDFISNLLKKDMK
Sbjct: 1707 FDEISDDAKDFISNLLKKDMK 1727