| EST name | EST sequence |
| gi|57002750|gb|CX146095.1|CX146095 | TTTTTTTTTTTTTTTTTTAACACTAATAGTCATTCATTTTATTGAACAGTATCTTAAGAAAAACAGTACACGCAGTGTTG ATCATTTTCATACAAAATAGTAGGAGTTGGTAGAGATGAGGGAGAGGAGCTTTAATCCATTCTGGCCTTCAGGGTACGTG TGGTGATCTTGTCCTTCTCAATGACTTGCACAATGACACCCATGCCTGAAACGGCATCCCTGTCCACTGCATTCAGCATG GCTTGGGAGATGGTCTCAAACAGGTCCTCTGGTTCCATGTCTGGCTCCCAGAGAGATTCACACATGCCGTACATCTGCTC TGAGCAAGTGCCGCTCACAACAAAGTCCTCTGTCACCATGGGGCAGCCAATCAGGTCCAGCGAGCAGATAAATGGCTCAA AGGTCTTGGGGTCCAGCCCAGCGATCACAGGCTCAATGTAGTATGGTCCAAATCTCCTCTCATACAGCAGGTTGGAGACC ATGCTCATGAATGTCTTGGGTTTGATCTGACGCCCCTCCTTCAGCTCATAGAGGTTCAATCTGAACTTGAGCCTCTGGGA AACTGTCTGTACGTCAGTAGCCAGGCCAGCCAGGCCAATGTAGAGTCTGTCTCCCATGGGAAAGATCTTCTGGAAGTCTG TGGTCACCATCTGAGCCTGTACACCGAATCTTCGATCTGCTGCAATGGCTACACATTGCTTACCCTTCATCGCCATGACG GCACCACCATTATAGGACATAATAGACATTGTGAATACGTTGAGGTATCTTCCTT |
Most similar to sp|O73817|PSB3_ONCMY
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O64748|COPE2_ARATH Coatomer subunit epsilon-2 OS=Arabidopsis
thaliana GN=At2g34840 PE=2 SV=1
Length = 293
Score = 208 bits (530), Expect(4) = 3e-97
Identities = 99/119 (83%), Positives = 108/119 (90%)
Frame = +1
Query: 316 LREWLADPTIGNNATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTD 495
L+EWLAD TIGNN TLRL+AG++FMHEEDY+E LKHTHAGGTMDL+ALNVQIFIKM R +
Sbjct: 95 LKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHAGGTMDLYALNVQIFIKMHRAE 154
Query: 496 YAEKQLGVMQQYDEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLILMAK 672
YAEKQL VMQQ DEDHTLTQLA+AW NLAVGGSKIQEAYLIF+DF EKYPMTCLIL K
Sbjct: 155 YAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDFSEKYPMTCLILNGK 213
Score = 157 bits (398), Expect(4) = 3e-97
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +2
Query: 56 PDHLFNLRNQFYLGAYQTAINNSEIRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
PDHLFNLRN FYLGAYQTAINNSEI NLSPE+AVERDCLVFRSYIALGSYQLVISEIDES
Sbjct: 8 PDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEIDES 67
Query: 236 AATPLQAVKLLAMYLSSPANKEST 307
AATPLQAVKLLAMYLS+P NKEST
Sbjct: 68 AATPLQAVKLLAMYLSTPQNKEST 91
Score = 29.6 bits (65), Expect(4) = 3e-97
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 689 MGNFDEAETLLLE 727
MGNFDEAETLLLE
Sbjct: 220 MGNFDEAETLLLE 232
Score = 23.5 bits (49), Expect(4) = 3e-97
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 654 LDLDGKAVCCIQ 689
L L+GKAVCC+Q
Sbjct: 208 LILNGKAVCCMQ 219
>sp|Q9SA78|COPE1_ARATH Coatomer subunit epsilon-1 OS=Arabidopsis
thaliana GN=At1g30630 PE=2 SV=1
Length = 292
Score = 211 bits (536), Expect(4) = 4e-94
Identities = 100/119 (84%), Positives = 109/119 (91%)
Frame = +1
Query: 316 LREWLADPTIGNNATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTD 495
LREWLADPT+GNNA +RL+AG +FMHEEDY+EALKHTH+GGTMDLHALNVQIFIKM R+D
Sbjct: 94 LREWLADPTVGNNAIIRLIAGTIFMHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSD 153
Query: 496 YAEKQLGVMQQYDEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLILMAK 672
+AEKQL VMQQ DEDHTLTQLA+AW NLAVGGSKIQEAYLIFQDF EKYPMT LIL K
Sbjct: 154 FAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGK 212
Score = 148 bits (374), Expect(4) = 4e-94
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +2
Query: 56 PDHLFNLRNQFYLGAYQTAINNSEIRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
PDHLFNLRN FYLGAYQ AINNSEI NLS ED VERDCLV R+YIALGSYQLVISEIDE+
Sbjct: 7 PDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEA 66
Query: 236 AATPLQAVKLLAMYLSSPANKEST 307
AATPLQAVKLLAMYLSSP NKEST
Sbjct: 67 AATPLQAVKLLAMYLSSPENKEST 90
Score = 28.1 bits (61), Expect(4) = 4e-94
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 689 MGNFDEAETLLLE 727
MGNF+EAETLLLE
Sbjct: 219 MGNFEEAETLLLE 231
Score = 21.6 bits (44), Expect(4) = 4e-94
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 654 LDLDGKAVCCI 686
L L+GKAVCC+
Sbjct: 207 LILNGKAVCCM 217
>sp|Q9MAX6|COPE1_ORYSJ Coatomer subunit epsilon-1 OS=Oryza sativa
subsp. japonica GN=COPE1 PE=2 SV=1
Length = 287
Score = 194 bits (494), Expect(4) = 2e-79
Identities = 88/119 (73%), Positives = 106/119 (89%)
Frame = +1
Query: 316 LREWLADPTIGNNATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTD 495
L+EWL+D +G+N LRL+AG++FMHE+DY+EALKHTH+GGT+DLHALNVQIFIKM R+D
Sbjct: 89 LKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEALKHTHSGGTLDLHALNVQIFIKMHRSD 148
Query: 496 YAEKQLGVMQQYDEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLILMAK 672
YAEKQL +MQQ DEDHTLTQLA AW ++AVGGSKI+EAYLIFQDF EKYPMT ++L K
Sbjct: 149 YAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGSKIREAYLIFQDFAEKYPMTGMVLNGK 207
Score = 115 bits (289), Expect(4) = 2e-79
Identities = 61/83 (73%), Positives = 68/83 (81%)
Frame = +2
Query: 56 PDHLFNLRNQFYLGAYQTAINNSEIRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
PD LFNLRN FYLGAYQ AINNS++ L + A ERD +VFRSY+ALGSYQLVISEID S
Sbjct: 4 PDLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQLVISEIDSS 63
Query: 236 AATPLQAVKLLAMYLSSPANKES 304
AAT LQAVKLLA+YLS +KES
Sbjct: 64 AATSLQAVKLLALYLS--GDKES 84
Score = 27.7 bits (60), Expect(4) = 2e-79
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 689 MGNFDEAETLLLE 727
MG+FDEAETLLLE
Sbjct: 214 MGSFDEAETLLLE 226
Score = 21.2 bits (43), Expect(4) = 2e-79
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 660 LDGKAVCCI 686
L+GKAVCC+
Sbjct: 204 LNGKAVCCM 212
>sp|P0C541|COPE2_ORYSJ Coatomer subunit epsilon-2 OS=Oryza sativa
subsp. japonica GN=Os04g0644700 PE=3 SV=1
Length = 297
Score = 168 bits (426), Expect(3) = 3e-64
Identities = 82/126 (65%), Positives = 99/126 (78%)
Frame = +1
Query: 313 KLREWLADPTIGNNATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRT 492
KL E LAD +G+N LRLVAG V MHE DY+ ALKHT++GGTM+L A+NVQI ++M R+
Sbjct: 98 KLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRS 157
Query: 493 DYAEKQLGVMQQYDEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLILMAK 672
D+AEKQL +MQQ DEDHTLTQLA AW +L +GGSKIQEA+LIFQD EKYP TCLIL K
Sbjct: 158 DHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGK 217
Query: 673 QFAVFN 690
+ +
Sbjct: 218 ALCLMH 223
Score = 94.4 bits (233), Expect(3) = 3e-64
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Frame = +2
Query: 56 PDHLFNLRNQFYLGAYQTAINNSEI----RNLSPEDAVERDCLVFRSYIALGSYQLVISE 223
PDHLF LRN FY+GAYQ I + LSP+ ERD L++RSYIA+GS+QLVI E
Sbjct: 7 PDHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDE 66
Query: 224 IDESAATPLQAVKLLAMYLSSPA-NKES 304
I AATPLQAV+LL +YLS A KES
Sbjct: 67 IGPGAATPLQAVRLLTVYLSGGAGGKES 94
Score = 25.0 bits (53), Expect(3) = 3e-64
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 680 LYSMGNFDEAETLLLE 727
L MGNF++AE LLLE
Sbjct: 221 LMHMGNFEDAEGLLLE 236
>sp|A2XY73|COPE2_ORYSI Coatomer subunit epsilon-2 OS=Oryza sativa
subsp. indica GN=H0413E07.10 PE=3 SV=2
Length = 297
Score = 168 bits (426), Expect(3) = 9e-64
Identities = 82/126 (65%), Positives = 99/126 (78%)
Frame = +1
Query: 313 KLREWLADPTIGNNATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRT 492
KL E LAD +G+N LRLVAG V MHE DY+ ALKHT++GGTM+L A+NVQI ++M R+
Sbjct: 98 KLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRS 157
Query: 493 DYAEKQLGVMQQYDEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLILMAK 672
D+AEKQL +MQQ DEDHTLTQLA AW +L +GGSKIQEA+LIFQD EKYP TCLIL K
Sbjct: 158 DHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGK 217
Query: 673 QFAVFN 690
+ +
Sbjct: 218 ALCLMH 223
Score = 92.8 bits (229), Expect(3) = 9e-64
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Frame = +2
Query: 56 PDHLFNLRNQFYLGAYQTAINNSEI----RNLSPEDAVERDCLVFRSYIALGSYQLVISE 223
PDHLF LR FY+GAYQ I + LSP+ ERD L++RSYIA+GS+QLVI E
Sbjct: 7 PDHLFGLRYSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDE 66
Query: 224 IDESAATPLQAVKLLAMYLSSPA-NKES 304
I AATPLQAV+LLA+YLS A KES
Sbjct: 67 IGPGAATPLQAVRLLAVYLSGGAGGKES 94
Score = 25.0 bits (53), Expect(3) = 9e-64
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 680 LYSMGNFDEAETLLLE 727
L MGNF++AE LLLE
Sbjct: 221 LMHMGNFEDAEGLLLE 236
>sp|Q5ZIK9|COPE_CHICK Coatomer subunit epsilon OS=Gallus gallus
GN=COPE PE=2 SV=1
Length = 308
Score = 101 bits (252), Expect(2) = 5e-38
Identities = 48/104 (46%), Positives = 70/104 (67%)
Frame = +1
Query: 352 NATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTDYAEKQLGVMQQY 531
N T L+A ++ H+++ AL+ H G +++ A+ +QI +K+ R D A K+L MQ+
Sbjct: 116 NTTFLLMAASIYFHDKNPDAALRTLHQGESLECMAMMIQILLKLDRLDLARKELKKMQEQ 175
Query: 532 DEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLIL 663
DED TLTQLATAW NLA+GG K+Q+AY IFQ+ +K T L+L
Sbjct: 176 DEDATLTQLATAWVNLAIGGEKLQDAYYIFQEMADKCSSTLLLL 219
Score = 77.8 bits (190), Expect(2) = 5e-38
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +2
Query: 59 DHLFNLRNQFYLGAYQTAINNSE-IRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
D LF+++N FY+GAYQ AIN ++ I+ +PE ERD +FRSYIA Y +V+ EI +
Sbjct: 17 DELFDVKNSFYIGAYQAAINEAQRIKPSNPEKETERDVFLFRSYIAQRKYGVVLDEIKAN 76
Query: 236 AATPLQAVKLLAMYLSSPANKES 304
A+ LQAV++ A YLS+ + +++
Sbjct: 77 ASPELQAVRMFAEYLSNESQRDA 99
>sp|O89079|COPE_MOUSE Coatomer subunit epsilon OS=Mus musculus
GN=Cope PE=2 SV=3
Length = 308
Score = 102 bits (254), Expect(2) = 4e-37
Identities = 50/104 (48%), Positives = 68/104 (65%)
Frame = +1
Query: 352 NATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTDYAEKQLGVMQQY 531
N T L+A ++ H+++ AL+ H G ++ A+ +QI +K+ R D A K+L MQ
Sbjct: 116 NTTFLLMAASIYFHDQNPDAALRTLHQGDGLECMAMTIQILLKLDRLDLARKELKKMQDQ 175
Query: 532 DEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLIL 663
DED TLTQLATAW NLAVGG K+QEAY IFQ+ +K T L+L
Sbjct: 176 DEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLL 219
Score = 73.9 bits (180), Expect(2) = 4e-37
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 59 DHLFNLRNQFYLGAYQTAINNSE-IRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
D LF+++N FY+G+YQ IN ++ ++ SPE VERD ++R+Y+A Y +V+ EI S
Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPEREVERDVFLYRAYLAQRKYGVVLDEIKPS 76
Query: 236 AATPLQAVKLLAMYLSSPANKES 304
+A LQAV++ A YL+S ++S
Sbjct: 77 SAPELQAVRMFAEYLASENQRDS 99
>sp|Q60445|COPE_CRIGR Coatomer subunit epsilon OS=Cricetulus griseus
GN=COPE PE=2 SV=2
Length = 308
Score = 103 bits (258), Expect(2) = 1e-36
Identities = 51/104 (49%), Positives = 69/104 (66%)
Frame = +1
Query: 352 NATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTDYAEKQLGVMQQY 531
N T L+A V+ H+++ AL+ H G +++ A+ +QI +K+ R D A K+L MQ
Sbjct: 116 NTTFLLMAASVYFHDQNPDAALRTLHQGDSLECMAMTIQILLKLDRLDLARKELKKMQDQ 175
Query: 532 DEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLIL 663
DED TLTQLATAW NLAVGG K+QEAY IFQ+ +K T L+L
Sbjct: 176 DEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLL 219
Score = 70.9 bits (172), Expect(2) = 1e-36
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 59 DHLFNLRNQFYLGAYQTAINNSE-IRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
D LF+++N FY+G+YQ IN ++ ++ SP+ VERD ++R+YIA Y +V+ EI S
Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPDREVERDVFLYRAYIAQRKYGVVLDEIKPS 76
Query: 236 AATPLQAVKLLAMYLSSPANKES 304
+A LQAV++ A YL++ +++
Sbjct: 77 SAPELQAVRMFADYLATENRRDA 99
>sp|Q5RFR8|COPE_PONAB Coatomer subunit epsilon OS=Pongo abelii
GN=COPE PE=2 SV=1
Length = 308
Score = 99.8 bits (247), Expect(2) = 2e-35
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = +1
Query: 352 NATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTDYAEKQLGVMQQY 531
N T L+A +++H+++ AL+ H G +++ A+ VQI +K+ R D A K+L MQ
Sbjct: 116 NTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175
Query: 532 DEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLIL 663
DED TLTQLATAW +LA GG K+Q+AY IFQ+ +K T L+L
Sbjct: 176 DEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLL 219
Score = 71.2 bits (173), Expect(2) = 2e-35
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 59 DHLFNLRNQFYLGAYQTAINNSE-IRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
D LF+++N FY+G+YQ IN ++ ++ SPE VERD ++R+Y+A + +V+ EI S
Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPETDVERDVFLYRAYLAQRKFGVVLDEIKPS 76
Query: 236 AATPLQAVKLLAMYLSSPANKES 304
+A LQAV++ A YL+ + ++S
Sbjct: 77 SAPELQAVRMFADYLAHESRRDS 99
>sp|Q28104|COPE_BOVIN Coatomer subunit epsilon OS=Bos taurus GN=COPE
PE=1 SV=3
Length = 308
Score = 97.1 bits (240), Expect(2) = 2e-35
Identities = 47/104 (45%), Positives = 68/104 (65%)
Frame = +1
Query: 352 NATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTDYAEKQLGVMQQY 531
N T L+A ++ ++++ AL+ H G +++ A+ VQI +K+ R D A K+L MQ
Sbjct: 116 NTTFLLMAASIYFYDQNPDAALRTLHQGDSLECMAMTVQILLKLDRLDLARKELKKMQDQ 175
Query: 532 DEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLIL 663
DED TLTQLATAW +LA GG K+Q+AY IFQ+ +K T L+L
Sbjct: 176 DEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLL 219
Score = 73.9 bits (180), Expect(2) = 2e-35
Identities = 35/83 (42%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +2
Query: 59 DHLFNLRNQFYLGAYQTAINNSE-IRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
D LF+++N FY+G+YQ IN ++ ++ SPE VERD ++R+Y+A Y +V+ EI S
Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPS 76
Query: 236 AATPLQAVKLLAMYLSSPANKES 304
+A LQAV++ A YL+S + +++
Sbjct: 77 SAPELQAVRMFAEYLASDSRRDA 99
>sp|O14579|COPE_HUMAN Coatomer subunit epsilon OS=Homo sapiens
GN=COPE PE=1 SV=3
Length = 308
Score = 99.8 bits (247), Expect(2) = 2e-35
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = +1
Query: 352 NATLRLVAGVVFMHEEDYSEALKHTHAGGTMDLHALNVQIFIKMRRTDYAEKQLGVMQQY 531
N T L+A +++H+++ AL+ H G +++ A+ VQI +K+ R D A K+L MQ
Sbjct: 116 NTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175
Query: 532 DEDHTLTQLATAWFNLAVGGSKIQEAYLIFQDFCEKYPMTCLIL 663
DED TLTQLATAW +LA GG K+Q+AY IFQ+ +K T L+L
Sbjct: 176 DEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLL 219
Score = 70.9 bits (172), Expect(2) = 2e-35
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 59 DHLFNLRNQFYLGAYQTAINNSE-IRNLSPEDAVERDCLVFRSYIALGSYQLVISEIDES 235
D LF+++N FY+G+YQ IN ++ ++ SPE VERD ++R+Y+A + +V+ EI S
Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPS 76
Query: 236 AATPLQAVKLLAMYLSSPANKES 304
+A LQAV++ A YL+ + ++S
Sbjct: 77 SAPELQAVRMFADYLAHESRRDS 99
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O73817|PSB3_ONCMY Proteasome subunit beta type-3 OS=Oncorhynchus
mykiss GN=psmb3 PE=2 SV=1
Length = 205
Score = 410 bits (1055), Expect = e-114
Identities = 204/205 (99%), Positives = 205/205 (100%)
Frame = -3
Query: 749 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 570
MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 569 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 390
QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 389 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 210
ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 209 SGMGVIVQVIEKDKITTRTLKARMD 135
SGMGV+VQVIEKDKITTRTLKARMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205