| EST name | EST sequence |
| gi|57716308|gb|CX601647.1|CX601647 | TCCTTGGGCGTCGGCAGCGGTGTGGCGGTGGCGGCCGGTGGGAAATGGCGGAGTACTTGGCCTCCATCTTCGGTACCGAG AAAGACAAAGTCAACTGTTCCTTCTATTTCAAAATTGGAGCATGTCGTCATGGAGACAGATGCTCTCGGTTGCACAATAA ACCGACCTTTAGCCAGCACTGAGTCTTGACTGAAGCGATCGCCACAGGAAACCGGTGCTGTGAGCGACGTCGAGATGCAG GAACACTATGATGAGTTTTTCGAGGAGGTTTTTACAGAAATGGAGGAGAAGTACGGTGAAGTTGAGGAGATGAACGTCTG TGATAACCTTGGCGATCACCTCGTTGGAAATGTGTATGTCAAGTTTCGCCGTGAAGAAGATGCGGAAAAGGCTGTGATTG ACTTGAACAACCGCTGGTTTAACGGACAGCCGATCCATGCGGAGCTCTCTCCCGTGACCGACTTCAGAGAAGCCTGCTGC CGCCAGTATGAGATGGGAGAGTGCACACGAGGAGGCTTCTGCAACTTCATGCACCTGAAGCCCATCTCGAGGGAGCTGCG GCGGGAGCTGTACGGGCGCCGGCGCAAGAAGCATAGATCGAGGTCCCGGTCTCGGGAGCGTCGCTCGCGGTCTCGGGACC GTGGTCGCGGTGGTGGCGGCGGCGGCGGTGGAGGCGGTGGGGGACGGGAGCGTGACCGG |
Most similar to sp|Q01081|U2AF1_HUMAN
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q01081|U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit OS=Homo
sapiens GN=U2AF1 PE=1 SV=3
Length = 240
Score = 194 bits (492), Expect(2) = 8e-72
Identities = 92/111 (82%), Positives = 92/111 (82%)
Frame = +1
Query: 217 AVSDVEMQEHYDXXXXXXXXXXXXXXXXXXXMNVCDNLGDHLVGNVYVKFRREEDAEKAV 396
AVSDVEMQEHYD MNVCDNLGDHLVGNVYVKFRREEDAEKAV
Sbjct: 68 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 127
Query: 397 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 549
IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS
Sbjct: 128 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 178
Score = 98.2 bits (243), Expect(2) = 8e-72
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 45 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 176
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 44
>sp|Q9D883|U2AF1_MOUSE Splicing factor U2AF 35 kDa subunit OS=Mus
musculus GN=U2af1 PE=1 SV=4
Length = 239
Score = 194 bits (492), Expect(2) = 8e-72
Identities = 92/111 (82%), Positives = 92/111 (82%)
Frame = +1
Query: 217 AVSDVEMQEHYDXXXXXXXXXXXXXXXXXXXMNVCDNLGDHLVGNVYVKFRREEDAEKAV 396
AVSDVEMQEHYD MNVCDNLGDHLVGNVYVKFRREEDAEKAV
Sbjct: 68 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 127
Query: 397 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 549
IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS
Sbjct: 128 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 178
Score = 98.2 bits (243), Expect(2) = 8e-72
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 45 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 176
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 44
>sp|A1A4K8|U2AF1_BOVIN Splicing factor U2AF 35 kDa subunit OS=Bos
taurus GN=U2AF1 PE=2 SV=1
Length = 237
Score = 194 bits (492), Expect(2) = 8e-72
Identities = 92/111 (82%), Positives = 92/111 (82%)
Frame = +1
Query: 217 AVSDVEMQEHYDXXXXXXXXXXXXXXXXXXXMNVCDNLGDHLVGNVYVKFRREEDAEKAV 396
AVSDVEMQEHYD MNVCDNLGDHLVGNVYVKFRREEDAEKAV
Sbjct: 68 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 127
Query: 397 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 549
IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS
Sbjct: 128 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 178
Score = 98.2 bits (243), Expect(2) = 8e-72
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 45 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 176
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 44
>sp|Q94535|U2AF1_DROME Splicing factor U2af 38 kDa subunit
OS=Drosophila melanogaster GN=U2af38 PE=1 SV=2
Length = 264
Score = 171 bits (433), Expect(2) = 8e-65
Identities = 79/110 (71%), Positives = 84/110 (76%)
Frame = +1
Query: 220 VSDVEMQEHYDXXXXXXXXXXXXXXXXXXXMNVCDNLGDHLVGNVYVKFRREEDAEKAVI 399
VSD EMQEHYD MNVCDNLGDHLVGNVY+KFR E DAEKA
Sbjct: 71 VSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAAN 130
Query: 400 DLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 549
DLNNRWF G+P+++ELSPVTDFREACCRQYEMGECTR GFCNFMHLKPIS
Sbjct: 131 DLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Score = 97.4 bits (241), Expect(2) = 8e-65
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 45 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 176
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSR+HNKPTFSQ
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQ 44
>sp|Q3T127|U2AF4_BOVIN Splicing factor U2AF 26 kDa subunit OS=Bos
taurus GN=U2AF1L4 PE=2 SV=1
Length = 220
Score = 184 bits (466), Expect = 6e-46
Identities = 88/128 (68%), Positives = 96/128 (75%), Gaps = 8/128 (6%)
Frame = +1
Query: 190 LKRSPQETGA--------VSDVEMQEHYDXXXXXXXXXXXXXXXXXXXMNVCDNLGDHLV 345
L R+PQ T VSDVE+QEHYD MNVCDNLGDHLV
Sbjct: 51 LYRNPQNTAQTADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLV 110
Query: 346 GNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCN 525
GNVYVKFRREEDAE+AV++LNNRWFNGQ +HAELSPVTDFRE+CCRQYEMGECTRGGFCN
Sbjct: 111 GNVYVKFRREEDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCN 170
Query: 526 FMHLKPIS 549
FMHL+PIS
Sbjct: 171 FMHLRPIS 178