miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|57810431|gb|CX611711.1|CX611711 CTCAAGCAACAGCTCGATGAGCGCAGGAACGGAGCCGAGCGCAAGACCGTGGATTTCTTCGATCTTGTGATTGATGAGCT
CGACAAGCCAAACTCTATAATGAGCGAGAGCATCGCGTTGAACTTATTGTTCTTGCTCCTCTTTGCAAGCCATGAAACGA
CGTCAATGGGGCTGACCGTGATACTCAAGTTTCTAACGGACAATCCAAAATCCTTGCAAGAATTGACCGAGGAGCATGAA
AAAATCATGGAAAGAAGGGTGGATCCAGACTCTGATATCACCTGGGAGGAGTACAAGTCTATGAAATTCACATCTCACGT
CATACATGAATCTCTTAGGCTCGCAAACATCGCTCCGGTGGTGTTCAGACAAGCAAACCAGGACGTACACATAAAGGGAT
ACACTATCCCAGAAGGATCAAAGATCATGATTTGTCCATCTGCAGCTCACCTGAATTCAAAGGTTTACGAGGACCCCTTG
GCATTCAATCCATGGAGATGGAAGGATACTCCTGAACCAGTTGGTGGCTCTAAGGATTTTATGGCCTTTGGGGGTGGTTT
GCGGTTATGTGTTGGTGCTGAGTTTGCCAAGCTGCAAATGGCTATGTTCCTCCACTACTTGGTCACCAATTACAGATGGA
AAGCCCTCAGCAAAGGGACGATGATGCTTTATCCCGGCCTGCGATTTCCGGACGGCTTTCACATCCAGCTTCATAAGAAA
ACATGAAGGCTCCATTTGGAACGTGTAATTTTTTTTTGTTCCTGTGTTGTTTCTACAAAAAATAAAATAAATCCTAAAAA
AACTA




Most similar to sp|Q7XU38|C87A3_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7XU38|C87A3_ORYSJ Cytochrome P450 87A3 OS=Oryza sativa subsp.
           japonica GN=CYP87A3 PE=2 SV=3
          Length = 514

 Score =  273 bits (699), Expect = 8e-73
 Identities = 133/240 (55%), Positives = 165/240 (68%)
 Frame = +1

Query: 1   LKQQLDERRNGAERKTVDFFDLVIDELDKPNSIMSESIAXXXXXXXXXASHETTSMGLTV 180
           L+  + ER    ER   DFFD VI EL +   +++E+IA         AS ETT++ LT+
Sbjct: 274 LRGMMKERMAEPERPCEDFFDHVIQELRREKPLLTETIALDLMFVLLFASFETTALALTI 333

Query: 181 ILKFLTDNPKSLQELTEEHEKIMERRVDPDSDITWEEYKSMKFTSHVIHESLRLANIAPV 360
            +K LT+NPK +  L EEHE I+  R DP+S +TW EYKSM FTS VI E +RLANI P 
Sbjct: 334 GVKLLTENPKVVDALREEHEAIIRNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVPG 393

Query: 361 VFRQANQDVHIKGYTIPEGSKIMICPSAAHLNSKVYEDPLAFNPWRWKDTPEPVGGSKDF 540
           +FR+A QDV IKGYTIP G  IM+CP A HLN ++YEDPLAFNPWRW+  PE  GG+K F
Sbjct: 394 IFRKALQDVEIKGYTIPAGWGIMVCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGTKHF 453

Query: 541 MAFGGGLRLCVGAEFAKLQMAMFLHYLVTNYRWKALSKGTMMLYPGLRFPDGFHIQLHKK 720
           MAFGGGLR CVG + +K+ MA F+H LVT Y W+ +  G ++  PGL FPDGFHIQL  K
Sbjct: 454 MAFGGGLRFCVGTDLSKVLMATFIHSLVTKYSWRTVKGGNIVRTPGLSFPDGFHIQLFPK 513