miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|57819638|gb|CX620851.1|CX620851 TGATGGTGCAAAGAAGATTCCTGTTCCCCCTTTTAGATCACCTTTGTGCATGCCTTTTCTTGTGGTCCGTGGGCAAGGAA
GGAGGCCGAAAATTGCATCAATGCCCCTCCCTTCTCTCTCTGTCTATACCCCCTCATACTGCATCACGATCAAGAGCATG
TATGCAAGTTGGTCTTTCTAGGGATGGCGAACTGACCGGCGATTTTCTGGTTATTCGTCCTGCAGGACATGGCGGACGCC
GTCGACCGCTTGAAGACCGGGTTCAACAAGTTCAAGACCGAGGTCTATGACAAGAAGCCGGAGCTGTTCGAGCCTCTCAA
GGCCGGCCAGTCCCCCAAGTACATGGTGTTTGCGTGCTCCGACTCCCGTGTGTGCCCGTCGGTGACCCTGGGTCTGCAGC
CCGGTGAGGCCTTCACCGTCCGCAACATCGCCGCCATGGTCCCAGCCTACGACAAGACCAAGTACACCGGCATTGGGTCT
GCCATTGAGTACGCCGTGTGCGCCCTCAAGGTGCAGGTCCTCGTCGTCATTGGCCACAGCTGCTGTGGTGGCGTCAGGGC
GCTCCTCTCCCTCCAGGATGGCGCACCTGACACC




Most similar to sp|P40880|CAHC_HORVU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum
           vulgare PE=2 SV=1
          Length = 324

 Score =  208 bits (530), Expect = 2e-53
 Identities = 99/122 (81%), Positives = 112/122 (91%)
 Frame = +1

Query: 229 MADAVDRLKTGFNKFKTEVYDKKPELFEPLKAGQSPKYMVFACSDSRVCPSVTLGLQPGE 408
           M  AV+RLKTGF KFKTEVYDKKP+ FEPLKAGQ+PKYMVFAC+DSRVCPSVTLGL+PGE
Sbjct: 123 MDAAVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGE 182

Query: 409 AFTVRNIAAMVPAYDKTKYTGIGSAIEYAVCALKVQVLVVIGHSCCGGVRALLSLQDGAP 588
           AFT+RNIA MVPAY K KY G+GSAIEYAVCALKV+V+VVIGHS CGG++ALLSL+DGA 
Sbjct: 183 AFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGAD 242

Query: 589 DT 594
           D+
Sbjct: 243 DS 244