miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|60455751|gb|DN287141.1|DN287141 TCGGGCTCCAGGGTTAGCTGTCAGTGTCTCTGTCCAGCTGTCCCCTGGCTCCCCTTTCCATCTTCTCCACCTGGGGAAAG
ACTCCAACGACAGTACTCAGTAGCACTTGGCTTCGGAAGAAGAGGTGATTTGAATGGTCTGGCTATTGCCATCAGGCGAG
GCGCTTCGGCCCCCCCCAGGTGCTGACCTGGACTCGGTCCATCCCTTTCTATCCAAAACTGTTTACCCACGGTGGAAGGG
GCCAGGCACCCAAATGGATACATCACCAATCAATTCAATGGGAGAGAAGGACAGCTGTCAACCGCAACAACAAGGGGAAA
AGAACCTTGAATTACCTACTCAGATTAGGCAGCATCGGGGAGAATCTCCTACGGAAATCCTTGAGCTGAAAGTGAGCCCA
GATCCAGCTAGCCAAATTCTACAGAATCCTCAGGAAATTGAAAAACTGCCTGCTGAACTTGAAAGAGACTCTGCTAAGTC
TCATGGATCAGCCAGTGCGATGTCAGAGCCCCTTCAAGCTTCTGATCTCTGGTACTGTCCTGATGGCAGCTTTGTCAAGA
AGATTGTAGTCCGTGGTCACGGCTTGGACAAACCCAAGCTGGGCTCCCACTGCACGGGTCGAGACTCTTGGGAGCTGGAG
GACACCGAGAAGGAGGCCTTGGCCAGAGAAGAACGTGCAAGGGGCACAGAATTATTTCGAGCGGGGAATCCGGAAGGAGC
TGCCCGATGCTATGCACGGGCTCTTCGGCTGCTGCTGACCTTACCCCCACCTGGCCCTCCGGAACGAACTGTACTTCACG
CCAACCTGGCTGCCTGTCAGTTGCTGCTAGGGCAGCCCCATTTGGCGGCC




Most similar to sp|Q9UIM3|FKBPL_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9UIM3|FKBPL_HUMAN FK506-binding protein-like OS=Homo sapiens
           GN=FKBPL PE=1 SV=1
          Length = 349

 Score =  169 bits (428), Expect = 2e-41
 Identities = 86/124 (69%), Positives = 98/124 (79%), Gaps = 4/124 (3%)
 Frame = +2

Query: 254 MDTSPINSMGEKDSCQPQQQGEKNL----ELPTQIRQHRGESPTEILELKVSPDPASQIL 421
           M+T P+N++GEKD+ QPQQ+ EKNL    +   QIRQ   + PTE LEL+VSPDPASQIL
Sbjct: 1   METPPVNTIGEKDTSQPQQEWEKNLRENLDSVIQIRQQPRDPPTETLELEVSPDPASQIL 60

Query: 422 QNPQEIEKLPAELERDSAKSHGSASAMSEPLQASDLWYCPDGSFVKKIVVRGHGLDKPKL 601
           ++ Q  EKL AELE DS KSHGS S M E LQASDLWYCPDGSFVKKIV+RGHGLDKPKL
Sbjct: 61  EHTQGAEKLVAELEGDSHKSHGSTSQMPEALQASDLWYCPDGSFVKKIVIRGHGLDKPKL 120

Query: 602 GSHC 613
           GS C
Sbjct: 121 GSCC 124