miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|62134607|gb|DN745494.1|DN745494 GTGTCGGNNNNCANTNNCNNGAANANNNGNNTNNGGCATNNNNNNNNNNNNNANNGAAATCTCATTGANNATTTTGTTCC
CTTCCTCCCCNTNNAATATAAACACCTAAAAATGTGCATCAGAGTNGAAATGCAGTCCCGAGGCTTTGATATTGATGAGG
ACATTGTCACCAAAGTGGCCGACGAGATGACATTTTTCCCCAAAGAAGAGAGAGTTTTCTCTGACAAAGGCTGCAAAACC
GTGTTCACCAAGTTAGATTACTACTACGATGACTGACACGGCACTGGAGTTGCTTCAAGTTGGAACACTCTGCTCTATTC
CCATATCTCCCCCAGCTCCATACACTGGAAGAGGACTAAAGTGAATGCTTCCTGTGGGACAGGACAGGCATTGCCCCAGG
CAGTGTTCATCCAGAGAGCCTTGCCAGTGTCCTACCCTACAGATCGTGGACTTCGAAAGAGCCCCCAGAGCGTTCAGAGG
AGGANNNAGCTCCCAATCCACTCGGCCCAGGGCTCATGATTTTTTAAAAATCATGTTTTAATCTTAAGTGTTTCTGTTTC
AAGGAAGGACGTCTAAGTTTTATTGAAAATGTGGTAACTTTATTTAAAATGGTT




Most similar to sp|O14656|TOR1A_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O14656|TOR1A_HUMAN Torsin-1A OS=Homo sapiens GN=TOR1A PE=1 SV=1
          Length = 332

 Score =  137 bits (346), Expect = 4e-32
 Identities = 64/79 (81%), Positives = 69/79 (87%)
 Frame = +1

Query: 37  HXXXXXXNLIXXFVPFLPXXYKHLKMCIRVEMQSRGFDIDEDIVTKVADEMTFFPKEERV 216
           H      NLI  FVPFLP  YKHLKMCIRVEMQSRG++IDEDIV++VA+EMTFFPKEERV
Sbjct: 254 HSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERV 313

Query: 217 FSDKGCKTVFTKLDYYYDD 273
           FSDKGCKTVFTKLDYYYDD
Sbjct: 314 FSDKGCKTVFTKLDYYYDD 332