miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|62874983|gb|DN890220.1|DN890220 CTGGACAACTTTTTAGCTCTTTACTTTTTCTTTTATTTCTGAAATAGGCAGGTTTTTTTTTTTTAATAAGTTTCCTGTTT
TAAATGAACACAGGTCAAGGTTCACAGGAGATCAAGAAATATTATTCTTGTATAATCTGTTTACTTTGACCTAAATACCA
GCTTTTAAATACTAACTCTGGCTTAAAATATTGCTGTAAATGGCAGCTCATTGAATACAGTTCTCAGTGCAATTATTTTT
AGTTTTATCTGAGCTTCCATTGAACAGTGGTATTTTAATTTTTTTTCAAGGGATATTTTAAGTATTTCTAAGATTAATTC
AATTAGTTTTTGTGTTGCTCTCAAGGCTAGAGCTAATGGTCTGCAGTCCTGTGTGATAATCATACGTATTCTCCGAGACC
TCTGTCAACGAGTTCCAACTTGGTCTGATTTCCCAAGCTGGGCTATGGAGTTGTTAGTAGAGAAAGCAATCAGCAGTGCT
TCTAGTCCTCAGAGCCCTGGAGATGCGCTGAGAAGAGTTTTTGAGTGTATTTCTTCTGGGATTATTCTTAAAGGTAGCCC
TGGACTTCTGGATCCTTGTGAAAAGGATCCCTTTGACACCTTGGCAACAATGACTGACCAGCAGCGTGAAGACATTACAT
CCAGTGCACAGTTTGCTTTGAGACTCCTTGCATTCCGCCAAATACACAAAGTGTTAGGCATGGATCCATTACCACAAATG




Most similar to sp|Q5REX3|ZFR_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5REX3|ZFR_PONAB Zinc finger RNA-binding protein OS=Pongo abelii
            GN=ZFR PE=2 SV=1
          Length = 1074

 Score =  252 bits (643), Expect = 2e-66
 Identities = 125/126 (99%), Positives = 126/126 (100%)
 Frame = +1

Query: 343  KARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVF 522
            +ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVF
Sbjct: 913  QARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVF 972

Query: 523  ECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGM 702
            ECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGM
Sbjct: 973  ECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGM 1032

Query: 703  DPLPQM 720
            DPLPQM
Sbjct: 1033 DPLPQM 1038