miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|71119223|gb|DR774561.1|DR774561 TTGGGGACGCGGCCGGCTACCGAGCCCTTTGTGAGGGCGTGAGCTGCGCCTGATCGGCGGCACCATGAGCGTCTCAGGTG
GGGCGCCCGCGGCGTCCGCCAGCTCTGCGCCGCCCACGCAGGAAGAGGGCATGACGTGGTGGTACCGCTGGCTGTGTCGC
CTGTCGGGGGTGCTGGGGGCAGTCTCTTGTGCGATCTCTGGCCTCTTCAACTGCATCACCATCCACCCTCTGAACATTGC
GGCCGGCGTGTGGATGATCATGAATGCCTTCATCTTGTTGCTGTGCGAGGCGCCCTTCTGCTGCCAGTTCATCGAGTTTG
CAAACACGGTGGCGGAGAAGGTGGACCGGCTGCGCTCCTGGCAGAAGGCTGTCTTCTACTGCGGGATGGCGGGTTGTCCC
ATCGTCTTCTTCCTGACCCTGGACACGCTGCTGGCGATCGCTTGTCGCCTTTTGCCACCGGGGTGCCGTTCGTACTGTCC
CGCTCTGGGCTTCTGGGCGCCAGGCTATCCTTCCCCCGCTTGGCGCCCCCTGCCAACCTCACTGGCTCAAGAGTTGCTGG
TCCTCTTGTCCTCTTCTGCGTTTCCTTTTT




Most similar to sp|Q9UGQ2|FLOWR_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9UGQ2|FLOWR_HUMAN Calcium channel flower homolog OS=Homo
           sapiens GN=C9orf7 PE=2 SV=1
          Length = 172

 Score =  217 bits (552), Expect = 5e-56
 Identities = 106/126 (84%), Positives = 106/126 (84%)
 Frame = +2

Query: 65  MSVSGGXXXXXXXXXXXTQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 244
           MS SGG            QEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA
Sbjct: 1   MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 60

Query: 245 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAGCPIVFFLTLD 424
           GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMA  PIV  LTL 
Sbjct: 61  GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 120

Query: 425 TLLAIA 442
           TLL  A
Sbjct: 121 TLLGNA 126