miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|71313702|gb|DR793436.1|DR793436 CTCAACCTCTCAACCTCAACTGCTGCATGCCGCCTATACATACTACGCACGCAGTCGCGCCCGGCCCTGCACTGCACTGC
ACGGGCGCGGCGGGAGATCGAGAGGAGACTTTGCTCGCTTTTGGTGGGCATCCGCGCGGAGCGTGACCACAGACGGTGTA
GAGACTAGATAGATCGGAAGGGGATCTAGGCATAGAGAGCGAGGAGGATGACCGGCGTTGTTGCAGGCGCCGGAGGGGGC
AACAAGGCGGCGGGCGCCACGCTGCGGCTGCACCACTACCTTGTGATGGCCGGGGTGGCGGCGGCGTTCGTCCTCGCCTG
CCTCCGGTACGCGCCGGACCCCGCGGGGTACGGCTTCCTGGCCGTGGCGCCGCGGCCGGTGGAGGCCGATGCTGGTGCCC
GGCGGGACACCACTCCTCCACCGCGCCCGTCGTCGTCGTCGTCGTCGGTGGTCATCTTCAACTTCGGTGACTCCAACTCC
GACACGGGCGGCATGGCGGCGGTCAACGGGATGAACATTAACCTGCCCGAGGGACGCACCTTCTTCCGCCGCCCCACCGG
AAGGCTCTCCGATGGCCGCCTCGTCATCGACTTCATCTGTGAGAGCCTGCACACGCCTTTCCTGAGCCCATACCTCAAGG
CGCTGGGCGCGGATTTCAGCAACGGCGTGAACTTCGCCATCGGCGGCTCGACGGCGACGCCGGGGGGCTCTCCATTCTCG
CTGGACGTGCAGCTCCATCAGTGGCTCTACTTCAAGGCCAGGTCCATGGAGATGATCAACCTAGGACAGAGGCCTCCCAT
CGATCGCGAAGGATTCCGAAAGGTCATCTACACCAT




Most similar to sp|O80522|GDL2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O80522|GDL2_ARATH GDSL esterase/lipase At1g09390 OS=Arabidopsis
           thaliana GN=At1g09390 PE=2 SV=1
          Length = 370

 Score =  144 bits (364), Expect = 6e-34
 Identities = 73/131 (55%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
 Frame = +1

Query: 451 VIFNFGDSNSDTGGMAAVNGMNINLPEGRTFFRRPTGRLSDGRLVIDFICESLHTPFLSP 630
           VIFNFGDSNSDTGG+ A  G +I LP GR+FF+R TGRLSDGRLVIDF+C+SL+T  L+P
Sbjct: 37  VIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNP 96

Query: 631 YLKAL-GADFSNGVNFAIGGSTATPGGSPFSLDVQLHQWLYFKARSMEMINLG---QRPP 798
           YL +L G+ F NG NFAI GS+  P   PF+L++QL Q+L+FK+R++E+ ++    +   
Sbjct: 97  YLDSLVGSKFQNGANFAIVGSSTLPRYVPFALNIQLMQFLHFKSRALELASISDPLKEMM 156

Query: 799 IDREGFRKVIY 831
           I   GFR  +Y
Sbjct: 157 IGESGFRNALY 167