miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|71441750|gb|DR822800.1|DR822800 GCCGCCTATACATACTACGCACGCAGTCGCGCCCGGCCCTGCACTGCACTGCACGGGCGCGGCGGGAGATCGAGAGGAGA
CTTTGCTCGCTTTTGGTGGGCATCCGCGCGGAGCGTGACCACAGACGGTGTAGAGACTAGATAGATCGGAAGGGGATCTA
GGCATAGAGAGCGAGGAGGATGACCGGCGTTGTTGCAGGCGCCGGAGGGGGCAACAAGGCGGCGGGCGCCACGCTGCGGC
TGCACCACTACCTTGTGATGGCCGGGGTGGCGGCGGCGTTCGTCCTCGCCTGCCTCCGGTACGCGCCGGACCCCGCGGGG
TACGGCTTCCTGGCCGTGGCGCCGCGGCCGGTGGAGGCCGATGCTGGTGCCCGGCGGGACACCACTCCTCCACCGCGCCC
GTCGTCGTCGTCGTCGTCGGTGGTCATCTTCAACTTCGGTGACTCCAACTCCGACACGGGCGGCATGGCGGCGGTCAACG
GGATGAACATTAACCTGCCCGAGGGACGCACCTTCTTCCGCCGCCCCACCGGAAGGCTCTCCGATGGCCGCCTCGTCATC
GACTTCATCTGTGAGAGCCTGCACACGCCTTTCCTGAGCCCATACCTCAAGGCGCTGGGCGCGGATTTCAGCAACGGCGT
GAACTTCGCCATCGGCGGCTCGACGGCGACGCCGGGGGGCTCTCCATTCTCGCTGGACGTGCAGCTCCATCAGTGGCTCT
ACTTCAGGGCCAGGTCCATGGAGATGATCAACCTAGGACAGAGGCCTCCCATCGATCGCGAAGGATTCCGAAAGGCCATC
TACACCATCGACATCGGGCAGAACGACGTGTCTGCTTACATGCACCTGCCCTACGACCAAGTGCTTGCCAAGATCCCTGG
ATTTGTTGC




Most similar to sp|O80522|GDL2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O80522|GDL2_ARATH GDSL esterase/lipase At1g09390 OS=Arabidopsis
           thaliana GN=At1g09390 PE=2 SV=1
          Length = 370

 Score =  164 bits (414), Expect = 1e-39
 Identities = 86/161 (53%), Positives = 115/161 (71%), Gaps = 6/161 (3%)
 Frame = +3

Query: 423 VIFNFGDSNSDTGGMAAVNGMNINLPEGRTFFRRPTGRLSDGRLVIDFICESLHTPFLSP 602
           VIFNFGDSNSDTGG+ A  G +I LP GR+FF+R TGRLSDGRLVIDF+C+SL+T  L+P
Sbjct: 37  VIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNP 96

Query: 603 YLKAL-GADFSNGVNFAIGGSTATPGGSPFSLDVQLHQWLYFRARSMEMINLG---QRPP 770
           YL +L G+ F NG NFAI GS+  P   PF+L++QL Q+L+F++R++E+ ++    +   
Sbjct: 97  YLDSLVGSKFQNGANFAIVGSSTLPRYVPFALNIQLMQFLHFKSRALELASISDPLKEMM 156

Query: 771 IDREGFRKAIYTIDIGQNDV--SAYMHLPYDQVLAKIPGFV 887
           I   GFR A+Y IDIGQND+  S    L Y +V+  IP  +
Sbjct: 157 IGESGFRNALYMIDIGQNDIADSFSKGLSYSRVVKLIPNVI 197