miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|71773810|gb|DR971705.1|DR971705 CGAGAGGAGACTTTGCTCGCTTTTGGTGGGCATCCGCGCGGAGCGTGACCACAGACGGTGTAGAGACTAGATAGATCGGA
AGGGGATCTAGGCATAGAGAGCGAGGAGGATGACCGGCGTTGTTGCAGGCGCCGGAGGGGGCAACAAGGCGGCGGGCGCC
ACGCTGCGGCTGCACCACTACCTTGTGATGGCCGGGGTGGCGGCGGCGTTCGTCCTCGCCTGCCTCCGGTACGCGCCGGA
CCCCGCGGGGTACGGCTTCCTGGCCGTGGCGCCGCGGCCGGTGGAGGCCGATGCTGGTGCCCGGCGGGACACCACTCCTC
CACCGCGCCCGTCGTCGTCGTCGTCGTCGGTGGTCATCTTCAACTTCGGTGACTCCAACTCCGACACGGGCGGCATGGCG
GCGGTCAACGGGATGAACATTAACCTGCCCGAGGGACGCACCTTCTTCCGCCGCCCCACCGGAAGGCTCTCCGATGGCCG
CCTCGTCATCGACTTCATCTGTGAGAGCCTGCACACGCCTTTCCTGAGCCCATACCTCAAGGCGCTGGGCGCGGATTTCA
GCAACGGCGTGAACTTCGCCATCGGCGGCTCGACGGCGACGCCGGGGGGCTCTCCATTCTCGCTGGACGTGCAGCTCCAT
CAGTGGCTCTACTTCAGGGCCAGGTCCATGGAGATGATCAACCTAGGACAGAG




Most similar to sp|O80522|GDL2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O80522|GDL2_ARATH GDSL esterase/lipase At1g09390 OS=Arabidopsis
           thaliana GN=At1g09390 PE=2 SV=1
          Length = 370

 Score =  139 bits (349), Expect = 2e-32
 Identities = 67/112 (59%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
 Frame = +2

Query: 353 VIFNFGDSNSDTGGMAAVNGMNINLPEGRTFFRRPTGRLSDGRLVIDFICESLHTPFLSP 532
           VIFNFGDSNSDTGG+ A  G +I LP GR+FF+R TGRLSDGRLVIDF+C+SL+T  L+P
Sbjct: 37  VIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNP 96

Query: 533 YLKAL-GADFSNGVNFAIGGSTATPGGSPFSLDVQLHQWLYFRARSMEMINL 685
           YL +L G+ F NG NFAI GS+  P   PF+L++QL Q+L+F++R++E+ ++
Sbjct: 97  YLDSLVGSKFQNGANFAIVGSSTLPRYVPFALNIQLMQFLHFKSRALELASI 148