miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|7540127|gb|AW674892.1|AW674892 AAATCCGGGAGCACTTGGAGAAGAAGAGGACCCCAGGTCAGAGACTGGAGCCATTACTTCAAGATCATCGAGGACCTGAG
GGCTCAGATCTTCGCAAATACTGTGGACAATGCCCGCATCGTTCTGCAGATTGACAATGCCCGTCTTGCTGCTGATGACT
TTAGAGTCAAGTATGAGACAGAGCTGGCCATGCGCCAGTCTGTGGAGAACGACATCCATGGGCTCCGCAAGGTCATTGAT
GACACCAATATCACACGACTGCAGCTGGAGACAGAGATCGAGGCTCTCAAAGAGGAGCTGCTCTTCATGAAGAAGAACCA
CGAAGAGGAAGTAAAAGGCCTACGAGCCCAGATTGCCAGCTCTGGGTTGACCGTGGAAGTAGATGCCCCCAAATCTCAGG
ACCTCGCCAAGATCATGGCAGACATCCGGGCCCAATATGAGGAGCTGGCTCGGAAGAACCGATATGAGCTAGACAAGTTC
TGGTCTCAGGAGATTGAGGAGAGCACCACAGTGGTCACCACACAGTCTGCTGAGGTTGGAGCTGCTGAGACGACGCTCAC
AGAGCTGATACGTAGAGTCCAGTGGTTGGAGATCGACGTGGACTC




Most similar to sp|P05783|K1C18_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P05783|K1C18_HUMAN Keratin, type I cytoskeletal 18 OS=Homo
           sapiens GN=KRT18 PE=1 SV=2
          Length = 430

 Score =  355 bits (910), Expect = 2e-97
 Identities = 183/194 (94%), Positives = 190/194 (97%)
 Frame = +1

Query: 22  RRGPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLAADDFRVKYETELAMRQS 201
           ++GPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLAADDFRVKYETELAMRQS
Sbjct: 118 KKGPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLAADDFRVKYETELAMRQS 177

Query: 202 VENDIHGLRKVIDDTNITRLQLETEIEALKEELLFMKKNHEEEVKGLRAQIASSGLTVEV 381
           VENDIHGLRKVIDDTNITRLQLETEIEALKEELLFMKKNHEEEVKGL+AQIASSGLTVEV
Sbjct: 178 VENDIHGLRKVIDDTNITRLQLETEIEALKEELLFMKKNHEEEVKGLQAQIASSGLTVEV 237

Query: 382 DAPKSQDLAKIMADIRAQYEELARKNRYELDKFWSQEIEESTTVVTTQSAEVGAAETTLT 561
           DAPKSQDLAKIMADIRAQY+ELARKNR ELDK+WSQ+IEESTTVVTTQSAEVGAAETTLT
Sbjct: 238 DAPKSQDLAKIMADIRAQYDELARKNREELDKYWSQQIEESTTVVTTQSAEVGAAETTLT 297

Query: 562 ELIRRVQWLEIDVD 603
           EL R VQ LEID+D
Sbjct: 298 ELRRTVQSLEIDLD 311