miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|76013045|gb|DT940215.1|DT940215 CGGCGGGAGATCGAGAGGAGACTTTGCTCGCTTTTGGTGGGCATCCGCGCGGAGCGTGACCACAGACGGTGTAGAGACTA
GATAGATCGGAAGGGGATCTAGGCATAGAGAGCGAGGAGGATGACCGGCGTTGTTGCAGGCGCCGGAGGGGGCAACAAGG
CGGCGGGCGCCACGCTGCGGCTGCACCACTACCTTGTGATGGCCGGGGTGGCGGCGGCGTTCGTCCTCGCCTGCCTCCGG
TACGCGCCGGACCCCGCGGGGTACGGCTTCCTGGCCGTGGCGCCGCGGCCGGTGGAGGCCGATGCTGGTGCCCGGCGGGA
CACCACTCCTCCACCGCGCCCGTCGTCGTCGTCGTCGTCGGTGGTCATCTTCAACTTCGGTGACTCCAACTCCGACACGG
GCGGCATGGCGGCGGTCAACGGGATGAACATTAACCTGCCCGAGGGACGCACCTTCTTCCGCCGCCCCACCGGAAGGCTC
TCCGATGGCCGCCTCGTCATCGACTTCATCTGTGAGAGCCTGCACACGCCTTTCCTGAGCCCATACCTCAAGGCGCTGGG
CGCGGATTTCAGCAACGGCGTGAACTTCGCCATCGGCGGCTCGACGGCGACGCCGGGGGGCTCTCCATTCTCGCTGGACG
TGCAGCTCCATCAGTGGCTCTACTTCAGGGCCAGGTCCATGGAGATGATCAACCTAGGACAGAGGCCTCCCATCGATCGC
GAAGGATTCCGAAAGGGCATCTACACCATCGACATCGGGCAGAACGACGTGTCTGCTTACATGCACCTGCCCTA




Most similar to sp|O80522|GDL2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O80522|GDL2_ARATH GDSL esterase/lipase At1g09390 OS=Arabidopsis
           thaliana GN=At1g09390 PE=2 SV=1
          Length = 370

 Score =  159 bits (401), Expect = 3e-38
 Identities = 79/141 (56%), Positives = 106/141 (75%), Gaps = 4/141 (2%)
 Frame = +1

Query: 364 VIFNFGDSNSDTGGMAAVNGMNINLPEGRTFFRRPTGRLSDGRLVIDFICESLHTPFLSP 543
           VIFNFGDSNSDTGG+ A  G +I LP GR+FF+R TGRLSDGRLVIDF+C+SL+T  L+P
Sbjct: 37  VIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNP 96

Query: 544 YLKAL-GADFSNGVNFAIGGSTATPGGSPFSLDVQLHQWLYFRARSMEMINLG---QRPP 711
           YL +L G+ F NG NFAI GS+  P   PF+L++QL Q+L+F++R++E+ ++    +   
Sbjct: 97  YLDSLVGSKFQNGANFAIVGSSTLPRYVPFALNIQLMQFLHFKSRALELASISDPLKEMM 156

Query: 712 IDREGFRKGIYTIDIGQNDVS 774
           I   GFR  +Y IDIGQND++
Sbjct: 157 IGESGFRNALYMIDIGQNDIA 177