miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|77269281|gb|CJ455857.1|CJ455857 CCGGATTCCTCGAGCCTGTTGGCCTACTGGGAAAAGCGGCCCGACCTGCTTGGGGTGTAGTGGGCGGACCGCGCGGCTGG
AGGTGTGAGGATCCAAGCTTAGGGGTGGGGGTGGAGGCGGCTCCTGCGATCGAGAGGGACTTGAGACTCACCGGCCGCAC
GCCATGACTGCCCTGTGGGTGCTGGGCCTCTGCTGCGTCCTGCTGACCTTCGGATCGGTCAGAGCTGACGACTAAGTTGA
TGTGGATGGTGCAGTAAAAGAGGATCTGGGTAAAAGTAGAGAAGGCTCTAGGACGGATGATGAAGTAGTGCAAACAGAGG
AAGAAGCTATGCAGATGGATGGATTAAATGCATGGGAGATAGGAGATCTTAGAGAGAGGGTTGTGAAGTTTGCCTTGTCT
GCGGGGGTGGACATGAGGAGGAGACGTGTATGGGAGGGGGGGTGAGAGGGAGTTATGGATGGAGTTGGGATATCTGTTTG
TAGTTGCATCGCCACTCTTTTAGTTACATACTAGCTATATATCTGACTGCTCGTTGTTGCGGTGAGGCGGCACGGAGGGA
TATAGTGATTGTGTTATAAATATAAGAGATAATAACTTAATGCATTGTGGAAGATCATAAGTGCGCTGTGTCGTATGTTG
AGTTGTGGAGGGTAAGAGTTTGAGGAATGAGTTTCAAATTTTAAGTGTCTAATGGTGTGGCGCCGTTTTAGTATATTATG
ATATTGGCGAAGTTTTTTATGTGAGATTGTAATCATTAAGAGGATTTAGTGAAAGAGTTAGG




Most similar to sp|Q5R6F7|ENPL_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R6F7|ENPL_PONAB Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2
           SV=1
          Length = 804

 Score =  104 bits (259), Expect = 8e-22
 Identities = 54/83 (65%), Positives = 61/83 (73%)
 Frame = +2

Query: 164 MTALWVLGLCCVLLTFGSXXXXXXXXXXXXXKEDLGKSREGSRTDDEVVQTEEEAMQMDG 343
           M ALWVLGLCCVLLTFGS             +EDLGKSREGSRTDDEVVQ EEEA+Q+DG
Sbjct: 1   MRALWVLGLCCVLLTFGSVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDG 60

Query: 344 LNAWEIGDLRERVVKFALSAGVD 412
           LNA +I +LRE+  KFA  A V+
Sbjct: 61  LNASQIRELREKSEKFAFQAEVN 83