miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|78114588|gb|DV532976.1|DV532976 CACGGGCGCGGCGGGAGATCGAGAGGAGACTTTGCTCGCTTTTGGTGGGCATCCGCGCGGAGCGTGACCACAGACGGTGT
AGAGACTAGATAGATCGGAAGGGGATCTAGGCATAGAGAGCGAGGAGGATGACCGGCGTTGTTGCAGGCGCCGGAGGGGG
CAACAAGGCGGCGGGCGCCACGCTGCGGCTGCACCACTACCTTGTGATGGCCGGGGTGGCGGCGGCGTTCGTCCTCGCCT
GCCTCCGGTACGCGCCGGACCCCGCGGGGTACGGCTTCCTGGCCGTGGCGCCGCGGCCGGTGGAGGCCGATGCTGGTGCC
CGGCGGGACACCACTCCTCCACCGCGCCCGTCGTCGTCGTCGTCGTCGGTGGTCATCTTCAACTTCGGTGACTCCAACTC
CGACACGGGCGGCATGGCGGCGGTCAACGGGATGAACATTAACCTGCCCGAGGGACGCACCTTCTTCCGCCGCCCCACCG
GAAGGCTCTCCGATGGCCGCCTCGTCATCGACTTCATCTGTGAGAGCCTGCACACGCCTTTCCTGAGCCCATACCTCAAG
GCGCTGGGCGCGGATTTCAGCAACGGCGTGAACTTCGCCATCGGCGGCTCGACGGCGACGCCGGGGGGCTCTCCATTCTC
GCTGGACGTGCAGCTCCATCAGTGGCTCTACTTCAGGGCCAGGTCCATGGAGATGATNCACCTAGGACAGAGGCCTCCCA
TCGATCGCGAAGGATTCCGAAGGGCCATCTACACCATCGACATCGGGCAGAACGACGTGTCTGCTTACATGCACCTG




Most similar to sp|O80522|GDL2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O80522|GDL2_ARATH GDSL esterase/lipase At1g09390 OS=Arabidopsis
           thaliana GN=At1g09390 PE=2 SV=1
          Length = 370

 Score =  159 bits (403), Expect = 2e-38
 Identities = 80/141 (56%), Positives = 106/141 (75%), Gaps = 4/141 (2%)
 Frame = +3

Query: 372 VIFNFGDSNSDTGGMAAVNGMNINLPEGRTFFRRPTGRLSDGRLVIDFICESLHTPFLSP 551
           VIFNFGDSNSDTGG+ A  G +I LP GR+FF+R TGRLSDGRLVIDF+C+SL+T  L+P
Sbjct: 37  VIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNP 96

Query: 552 YLKAL-GADFSNGVNFAIGGSTATPGGSPFSLDVQLHQWLYFRARSMEMXHLG---QRPP 719
           YL +L G+ F NG NFAI GS+  P   PF+L++QL Q+L+F++R++E+  +    +   
Sbjct: 97  YLDSLVGSKFQNGANFAIVGSSTLPRYVPFALNIQLMQFLHFKSRALELASISDPLKEMM 156

Query: 720 IDREGFRRAIYTIDIGQNDVS 782
           I   GFR A+Y IDIGQND++
Sbjct: 157 IGESGFRNALYMIDIGQNDIA 177