miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|8088322|gb|AW922497.1|AW922497 CGATCTTGTGATTGATGAGCTCGACAAGCCAAACTCTATAATGAGCGAGAGCATCGCGTTGAACTTATTGTTCTTGCTCC
TCTTCGCAAGCCATGAAACGACGTCAATGGGGCTGACCGTGATACTCAAGTTTCTAACGGACAATCCAAAATCCTTGCAA
GAATTGACCGAGGAGCATGAAAAAATCATGGAAAGAAGGGTGGATCCAGACTCTGATATCACCTGGGAGGAGTACAAGTC
TATGAAATTCACATCTCACGTCATACATGAATCTCTTAGGCTCGCAAACATCGCTCCGGTGGTGTTCAGACAAGCAAACC
AGGACGTACACATAAAGGGATACACTATCCCAGAAGGATCAAAGATCATGATTTGTCCATCTGCAGCTCACCTGAATTCA
AAGGTTTACGAGGACCCCTTGGCATTCAATCCATGGAGATGGAAGGATACTCCTGAACCAGTTGGTGGCTCTAAGGATTT
TATGGCCTTTGGGGGTGGTTTGCGGTTATGTGTTGGTGCTGAGTTTGCCAAGCTGCAAATGGCTATGTTCCTCCACTACT
TGGTCACCAATTACAGATGGAAAGCCCTCAGCAAAGGGACGATGATGCTTTATCCCGGCCTGCGATTTCCGGACGGCTTT
CACATCCAGCTTCATAAGAAAACATGAAGGCTCCATTTGGAACGTGTAATTTTTTTTGTTCCTGTGTTGTTTCTACAAAA
AATA




Most similar to sp|Q7XU38|C87A3_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7XU38|C87A3_ORYSJ Cytochrome P450 87A3 OS=Oryza sativa subsp.
           japonica GN=CYP87A3 PE=2 SV=3
          Length = 514

 Score =  261 bits (666), Expect = 4e-69
 Identities = 125/220 (56%), Positives = 155/220 (70%)
 Frame = +2

Query: 2   DLVIDELDKPNSIMSESIAXXXXXXXXXASHETTSMGLTVILKFLTDNPKSLQELTEEHE 181
           D VI EL +   +++E+IA         AS ETT++ LT+ +K LT+NPK +  L EEHE
Sbjct: 294 DHVIQELRREKPLLTETIALDLMFVLLFASFETTALALTIGVKLLTENPKVVDALREEHE 353

Query: 182 KIMERRVDPDSDITWEEYKSMKFTSHVIHESLRLANIAPVVFRQANQDVHIKGYTIPEGS 361
            I+  R DP+S +TW EYKSM FTS VI E +RLANI P +FR+A QDV IKGYTIP G 
Sbjct: 354 AIIRNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVPGIFRKALQDVEIKGYTIPAGW 413

Query: 362 KIMICPSAAHLNSKVYEDPLAFNPWRWKDTPEPVGGSKDFMAFGGGLRLCVGAEFAKLQM 541
            IM+CP A HLN ++YEDPLAFNPWRW+  PE  GG+K FMAFGGGLR CVG + +K+ M
Sbjct: 414 GIMVCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGTKHFMAFGGGLRFCVGTDLSKVLM 473

Query: 542 AMFLHYLVTNYRWKALSKGTMMLYPGLRFPDGFHIQLHKK 661
           A F+H LVT Y W+ +  G ++  PGL FPDGFHIQL  K
Sbjct: 474 ATFIHSLVTKYSWRTVKGGNIVRTPGLSFPDGFHIQLFPK 513