miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|82977882|gb|DV921631.1|DV921631 GGTCTTGGCAAGACAAGCAGTGTGGCCAGAATTTTGAACTTCTGATAAGTGTGTAACGCAAAGGACCATGTACATTTTTG
TTGAAAGGTCCTCAAAATGAGAGCACACGAGGAGGTTGCTGTGAACTTTTAAGTGGCCCTACTGCGCAGAAGCATTCAGA
TGTCACTTGATGATCTGTAAGGGGACTTGCTAATTTGGGACTGTTAGGAAATACACACGTCCTTTGGACACGCTCCATCA
TTGGGTGGGTAATAAGGTATACAGATGACGTGTGCTTTTTGTTTTTTTTTCTTCCCCCCCTTCAACCTCAATGGTATTCC
TACAGGGAATGGATAACCATTTTAACTGTATTTTTTGCAGCCCATACCTTCTTGGGAATACAATTGTCTAACTTTTTATT
TTTGGTCTGGCTGTTGTGGTGTGCAAAACCCTGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGAT
GTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTAC
CAAAACAGGCACAGCATACACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGACCTTATCTCTGTGCTTCGGGAAG
CTAATCAAGCAATTAATCCTAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATG
AAGGATGACCGGCGGGACAGATACTCTGCGGGCAAGAGGGGTGGATTTAATACATTTAGAGACAGGGAAAATTATGACCG
CGGTTACTCTAGTCTGCTTAAGAGAGATTTTGGGGCAAAAACTCAGAATGGTGTTTACAGTGCTGCAAATTACACCAATG
GGAGCTT




Most similar to sp|A5A6J2|DDX5_PANTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5
           OS=Pan troglodytes GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  234 bits (598), Expect = 5e-61
 Identities = 119/139 (85%), Positives = 119/139 (85%)
 Frame = +1

Query: 469 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 648
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 649 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTFRDRENYDRGYSSLLKRD 828
           AINPKLLQLVE                    YSAGKRGGFNTFRDRENYDRGYSSLLKRD
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRD 525

Query: 829 FGAKTQNGVYSAANYTNGS 885
           FGAKTQNGVYSAANYTNGS
Sbjct: 526 FGAKTQNGVYSAANYTNGS 544