miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|82988642|gb|DV931453.1|DV931453 AAAAAGCAGTGCTTTGAAAGTTCCTCCCTCACCTACACAGTAGTCGTCATGTCGAGACCTGCCAGAGAGAGACACATTCT
CAAGTGAATCCTGGCTTCTTGGAAGCGCTTGCCTAGACGAGACACAGTGCATAAAAACAACTTTTGGGGGACAGGTATGT
TTTTCTTGCAGCTGCGGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAATTTTGAACTTCTGATAAGTGTGTAAC
GCAAAGGACCATGTACATTTTTGTTGAAAGGTCCTCAAAATGAGAGCACACGAGGAGGTTGCTGTGAACTTTTAAGTGGC
CCTACTGCGCAGAAGCATTCAGATGTCACTTGATGATCTGTAAGGGGACTTGCTAATTTGGGACTGTTAGGAAATACACA
CGTCCTTTGGACACGCTCCATCATTGGGTGGGTAATAAGGTATACAGATGACGTGTGCTTTTTGTTTTTTTTTCTTCCCC
CCCTTCAACCTCAATGGTATTCCTACAGGGAATGGATAACCATTTTAACTGTATTTTTTGCAGCCCATACCTTCTTGGGA
ATACAATTGTCTAACTTTTTATTTTTGGTCTGGCTGTTGTGGTGTGCAAAACCCTGTACATTGCTATTTTGCCACACTGC
AACACCTTACAGATGTGGAAGATGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGA
ATTGGAAGAACTGCTCGCAGTACCAAAACAGGCACAGCATACACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGA
CCTTATCTCTGTGCTTCGGGGAGCTAATCAAGCAATTAATCCTAAGTTGC




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  132 bits (333), Expect = 2e-30
 Identities = 65/66 (98%), Positives = 65/66 (98%)
 Frame = +1

Query: 652 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLRGANQ 831
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLR ANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 832 AINPKL 849
           AINPKL
Sbjct: 466 AINPKL 471