miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|83078449|gb|DB106337.1|DB106337 ATTTTAGACACAGTCTTGCTCTGTCACCCAGGCTGGAGTGCGGTGGTATTATCTCGGCTCACTGCAACCTCCACCTCTCG
GGTTCAAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGAATTACAGGCACCCACCACCACACCCAGCTAATTTTTGT
ATTTTTAGTAGAGACAGGGTTTTACCATGTGACCAGGCTGGTTTCGAACTCCTGACCTCAAATGATCCACCTGCCTCAGC
CTCCCAAACTGCTGGGATTACAGGTGTGAGCCACCGCTCCCAGCCTATTTGCTAATATTTAACCTCTTGAGAGTCTTTAA
TTCTTTTTTTCAACAAGTGTTCATTACCTGCTATGTGCCAGCTTAGATGCTTTGGATGAAATACAGGTTGGTGCGAAAGT
AATTGCGATTTTTGCCGTTAAAATTANAAAAACCACAATTACTTTTGCACCAACCTAAATAACTAAAACACAATTTCTTC
CTATCATGGGGCTTTCA




Most similar to sp|Q8N2A0|CX062_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by
           NCRNA00269 OS=Homo sapiens GN=NCRNA00269 PE=5 SV=1
          Length = 174

 Score = 83.6 bits (205), Expect(2) = 2e-25
 Identities = 43/62 (69%), Positives = 46/62 (74%)
 Frame = +3

Query: 6   RHSLALSPRLECGGIISAHCNLHLSGSSNSPASAFRVAGITGTHHHTQLIFVFLVETGFY 185
           R SL L PRLEC G ISAH NL L GSSNSP SA +VA  T   HHT+LIFVF VETGF+
Sbjct: 72  RWSLTLLPRLECSGTISAHYNLRLLGSSNSPVSASQVAETTEACHHTRLIFVFSVETGFH 131

Query: 186 HV 191
           HV
Sbjct: 132 HV 133



 Score = 52.4 bits (124), Expect(2) = 2e-25
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +2

Query: 194 QAGFELLTSNDPPASASQTAGITGVSHRSQP 286
           QAG +LLTS DPPASASQ+AGITGVSH ++P
Sbjct: 135 QAGLKLLTSGDPPASASQSAGITGVSHSARP 165


>sp|Q6B4Z3|UTY_PANTR Histone demethylase UTY OS=Pan troglodytes GN=UTY
            PE=2 SV=1
          Length = 1079

 Score =  101 bits (252), Expect = 2e-21
 Identities = 52/85 (61%), Positives = 60/85 (70%)
 Frame = +2

Query: 29   QAGVRWYYLGSLQPPPLGFKQFSCLSLPSSWNYRHPPPHPANFCIFSRDRVLPCDQAGFE 208
            +AG++W  L SLQPPP GFK+FS LSLP+SWNYRH P  P NFCIF         QA  E
Sbjct: 995  RAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHVGQAHLE 1054

Query: 209  LLTSNDPPASASQTAGITGVSHRSQ 283
            LLTS    ASASQ+AGITGVSH ++
Sbjct: 1055 LLTSGGLLASASQSAGITGVSHHAR 1079