miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|83206490|gb|DB229650.1|DB229650 GCTGGGGTCTCAGGAGGCAGCGCTCTCGGGACGTCTCCACCATGGCGAGGGCTCTGCTATTCCTCACCCTCCTCACTCAG
GGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCAGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTC
CTGCAGTGGATCCAGCAGTGACATTGGCACTTATAATTTTGTCTCCTGGTACCAACAACACCCAGACAAACCCCCCAAAC
TCATAATTTATGATGTCAGTTCTCGGCCCTCAGGTGTTCCTGATCGCTTCTCCGGCTCCAAGTCTGGCGACACGGCCTCC
CTGACCATCTCTGGACTCCAGGCTGACGACAAGGCTGACTATTATTGCAACTCATATACAACTTCGAGCACTACAGTCTT
CGGATCTGGGACCAGGGTCACCGTCCTCGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGG
AGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTTCCCGGGAGCTGTGACAGTGGCCTGGAAGGCA
GATGGCAGCCCC




Most similar to sp|P01708|LV205_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
           sapiens PE=1 SV=1
          Length = 109

 Score =  120 bits (302), Expect = 4e-27
 Identities = 61/87 (70%), Positives = 66/87 (75%)
 Frame = +3

Query: 99  QSALTQPASVSGSPXXXXXXXXXXXXXXXXTYNFVSWYQQHPDKPPKLIIYDVSSRPSGV 278
           QSALTQP SVSGSP                 Y +VSWYQQHP K PKLIIY+VSSRPSGV
Sbjct: 1   QSALTQPRSVSGSPGHSVTISCIGTSSNVGDYKYVSWYQQHPGKAPKLIIYEVSSRPSGV 60

Query: 279 PDRFSGSKSGDTASLTISGLQADDKAD 359
           PDRFSGSKSG+TASLTISGLQA+D+AD
Sbjct: 61  PDRFSGSKSGNTASLTISGLQAEDEAD 87