miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|88610132|gb|DY476730.1|DY476730 GGATTCTACTCCTAAGTCATCATGGGCTTTATCCAACTCCTGATGAAAAAGAAGGAACTTATTCCTTTGGTGTTTTTCAT
GACCGTGGCAGCGACTGGAGCTTCGGCATTTGCTATGTATTCCCTTCGAAAAACCGATGTGATCCTTGATCGAAAAAGAA
ATCCAGAACCTTGGGAAACTGTGGATCCTACTGTACCTACAAAGCTTGTGACAATCAACCAAGAATGGAAGCCCATTGAA
GAGTTGCAGAAGGTCCGAAGGGCAACCAGGTGACCAGTCCTCGCCTTTTTCTTCCAAAGAGTACTCTATGAATCTAGTGG
AAACACTTCTGCACAAACTAGATTATGGATACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGGCCTGCCTACGTTT
TTGGACTCTGGATAAGGAATTATAAAGGTAGCACAGCATAACCACATAGTCCC




Most similar to sp|Q5RK28|NMES1_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5RK28|NMES1_RAT Normal mucosa of esophagus-specific gene 1
          Length = 83

 Score =  140 bits (353), Expect = 3e-33
 Identities = 64/83 (77%), Positives = 75/83 (90%)
 Frame = +1

Query: 22  MGFIQLLMKKKELIPLVFFMTVAATGASAFAMYSLRKTDVILDRKRNPEPWETVDPTVPT 201
           MG  Q LMK KELIPL FF++ AATGAS+FA+Y+L+KTDV++DRKRNPEPWETVDPT P 
Sbjct: 1   MGIFQRLMKNKELIPLAFFISAAATGASSFALYALKKTDVVIDRKRNPEPWETVDPTQPQ 60

Query: 202 KLVTINQEWKPIEELQKVRRATR 270
           KL+TINQEWKP+EELQ+VRRATR
Sbjct: 61  KLLTINQEWKPVEELQRVRRATR 83