miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|88624456|gb|DY491055.1|DY491055 CCCCAGGACGTCTGACGGTGCCCGCTGCCATGGCGACGCTGCTGCGCCGGGTCTTGCGCCCGCTCTGCGCCTTCCGCGGC
AGTCCAGGTCCTTCTGCAGGTGTTCCCCTCAGAGCCGTGAGCCATGGCGCCGGCCTGCTCTACCCCGAACACATCCCCAC
CTCCCTGCTGCAGAAGGTGCTGCTGGCCGCCGGCTCTGCCGGGATGGCGCTCTACAATCCCTATCGCCACGACATGGTTG
CAGTTCTGGGAGAGACCACAGGACACCGTGCCCTGAAGGTCCTCAGGGACCAGATGAAGAGGGATCCAGAGGGTGCCCAG
ATCCTGCAGGAGCGTCCCCGGATCTCGCTGTCCACCCTCGACATGGGCAAGCTCCGCAGTCTGCCCGAGGGCTCCTTTGG
CTGCGCGTATCTCCATTTTCTGGATGTGAATAAGGTCTCCCCAGACACCCGCGCACCCACCCGCTTCGTGGACGATGAGG
AGCTGGCATACGTGATCCAGCGGTATCGGGAGATCCATGACATGCTCCACACCCTGCTGGGCATGCCCACCAACATCCTG
GGGGAGATCGTGGTGAAATGGTTTGAGGCTGTCCAGACCGGCCTGCCCATGTGCGTCCTGAGTGCACTCTTCGGACCGAT
C




Most similar to sp|Q9Y3A0|COQ4_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9Y3A0|COQ4_HUMAN Ubiquinone biosynthesis protein COQ4 homolog,
           mitochondrial OS=Homo sapiens GN=COQ4 PE=2 SV=3
          Length = 265

 Score =  337 bits (865), Expect = 3e-92
 Identities = 170/204 (83%), Positives = 179/204 (87%)
 Frame = +3

Query: 30  MATLLRRVLRPLCAFRGSPGPSAGVPLRAVSHGAGLLYPEHIPTSLLQKVLLAAGSAGMA 209
           MATLLR VLR LC   G   P+A +PLRA S GAG LY  H+PTS LQK LLAAGSA MA
Sbjct: 1   MATLLRPVLRRLCGLPGLQRPAAEMPLRARSDGAGPLYSHHLPTSPLQKGLLAAGSAAMA 60

Query: 210 LYNPYRHDMVAVLGETTGHRALKVLRDQMKRDPEGAQILQERPRISLSTLDMGKLRSLPE 389
           LYNPYRHDMVAVLGETTGHR LKVLRDQM+RDPEGAQILQERPRIS STLD+GKL+SLPE
Sbjct: 61  LYNPYRHDMVAVLGETTGHRTLKVLRDQMRRDPEGAQILQERPRISTSTLDLGKLQSLPE 120

Query: 390 GSFGCAYLHFLDVNKVSPDTRAPTRFVDDEELAYVIQRYREIHDMLHTLLGMPTNILGEI 569
           GS G  YL FLDVN+VSPDTRAPTRFVDDEELAYVIQRYRE+HDMLHTLLGMPTNILGEI
Sbjct: 121 GSLGREYLRFLDVNRVSPDTRAPTRFVDDEELAYVIQRYREVHDMLHTLLGMPTNILGEI 180

Query: 570 VVKWFEAVQTGLPMCVLSALFGPI 641
           VVKWFEAVQTGLPMC+L A FGPI
Sbjct: 181 VVKWFEAVQTGLPMCILGAFFGPI 204