miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|89225994|gb|DY599876.1|DY599876 GACTACTAGAGTTTACAGCATTGGGCGCAGCGTCAAGGGAAGACATCTGTATGCCCTGGAATTCAGTGACTTCCCTGGAA
TGCATGAGCTCTTGGAGCCAGAATTTAAGTATATTGGAAACATGCATGGGAATGAAGTTCTGGGGAGAGAGCTGCTGATC
CAACTCTGTGAGTTCCTGTGCGAAGAGTACCGCCAGAGGAATGAACGCATCATCCGGCTGATTCACAACACAAGGATTCA
CATCCTGCCTTCCATGAACCCGGATGGTTATGAAGTAGCTGCAGAACAGGGCCCAGATGCCAATGGGTATCTTACTGGCC
GGAACAATGCCAATGGAGTAGACCTAAACCGAAACTTTCCGGATCTTAACACCTACATGTACTACAATGAGAAGAGTGGG
GGGCCCAACCACCACATACCCCTTCCAGACAACTGGAGAAATCAGGTGGAACCAGAGACTGAGGCTGTTATACAGTGGAT
GGAATCCATCAACTTTGTTCTTTCTGCCAATCTTCATGGAGGTGCAGTTGTAGCCAATTACCCGTATGACAAGTCCCGTG
AGCATCGGGTTCGGGGTTTCCGTCGTACTGCTGATACTCCCACTCCAGATGATAAACTTTTCAGAAAGCTGGCCAAAGGC
TATTCCTATGCACATGGATGGATACACCTGGGCTGGAACTGTGGCGATTACTTTCCTGATGGCATCACCAATGGGGCTTC
CTGGTATTCTGTCAGCAAGGGAATGCAAGACTTCAATTACCTCCATACCAACTGCTTTGATATCACTCTGGAATTGAGTT
GTAATAAGTTTCCACGCCAGGAGAGCTGCAAAGGGAGTGGCTTGCACCGGGNGCACTGATAGTTTCCTGGNGNGTTCACC
ATGNNATCNNGNNTGATATTGGATGAGAATATATGGCATCCACAG




Most similar to sp|Q2KJ83|CBPN_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q2KJ83|CBPN_BOVIN Carboxypeptidase N catalytic chain OS=Bos
           taurus GN=CPN1 PE=2 SV=1
          Length = 462

 Score =  502 bits (1293), Expect = e-141
 Identities = 230/273 (84%), Positives = 253/273 (92%), Gaps = 1/273 (0%)
 Frame = +2

Query: 5   TRVYSIGRSVKGRHLYALEFSDFPGMHELLEPEFKYIGNMHGNEVLGRELLIQLCEFLCE 184
           TRVYSIGRSVKGRHLY LEFSD+PG+HE LEPE KY+GNMHGNEVLGRELL+QL EFLCE
Sbjct: 45  TRVYSIGRSVKGRHLYVLEFSDYPGIHEPLEPEVKYVGNMHGNEVLGRELLLQLSEFLCE 104

Query: 185 EYRQRNERIIRLIHNTRIHILPSMNPDGYEVAAE-QGPDANGYLTGRNNANGVDLNRNFP 361
           E+R RN+RI+RL+ +TRIHI+PSMNPDGYEVAA  Q  D +GYL GRNNANGVDLNRNFP
Sbjct: 105 EFRNRNQRIVRLVEDTRIHIMPSMNPDGYEVAAAAQERDISGYLVGRNNANGVDLNRNFP 164

Query: 362 DLNTYMYYNEKSGGPNHHIPLPDNWRNQVEPETEAVIQWMESINFVLSANLHGGAVVANY 541
           DLNTY+YYNEK+GGPNHH PLPDNW++QVEPET+AVIQW+ S NFVLSANLHGGAVVANY
Sbjct: 165 DLNTYIYYNEKNGGPNHHFPLPDNWKSQVEPETQAVIQWIRSFNFVLSANLHGGAVVANY 224

Query: 542 PYDKSREHRVRGFRRTADTPTPDDKLFRKLAKGYSYAHGWIHLGWNCGDYFPDGITNGAS 721
           PYDKS  HRVRGFRRTA+TPTPDDKLF+KLAK YSYAHGW+H GWNCGDYFPDGITNGAS
Sbjct: 225 PYDKSLGHRVRGFRRTANTPTPDDKLFQKLAKIYSYAHGWMHQGWNCGDYFPDGITNGAS 284

Query: 722 WYSVSKGMQDFNYLHTNCFDITLELSCNKFPRQ 820
           WYS+SKGMQDFNYLHTNCF+ITLELSC+KFP Q
Sbjct: 285 WYSLSKGMQDFNYLHTNCFEITLELSCDKFPLQ 317