miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|89228497|gb|DY602379.1|DY602379 GAGAAAACTGACTTGGGTGTCCTTGGCTTCTGAAGGGAAGAGAAGTCAGGGCTGGAGAAGAAGGGGGTGCTTCTGAAGAA
ACAGGCCCAGGAAGATGTCCAAAGTGTTCCGGGTCCTTTTCCGGCTCCTGTTGCTGTTAGGTGGGGTGGCTTCTGTGACA
TTTCAACATCATCGTTATGATGATCTCATTCGGACCTTATACAAGGTTCACAATGAGTGCCCCCACATCACTAGAGTTTA
CAGCATTGGGCGCAGCGTCAAGGGAAGACATCTGTATGCCCTGGAATTCGGTGACTTCCCTGGAATGCATGAGCTCTTGG
AGCCAGAATTTAAGTATATTGGAAACATGCATGGGAATGAAGTTCTGGGGAGAGAGCTGCTGATCCAACTCTGTGAGTTC
CTGTGCGAAGAGTACCGCCAGAGGAATGAACGCATCGTCCGGCTGATTCACAACACAAGGATTCACATCCTGCCTTCCAT
GAACCCGGATGGTTATGAAGTAGCTGCAGAACAGGGCCCAGATGCCAATGGGTATCTTACTGGCCGGAACAATGCCAATG
GAGTAGACCTAAACCGAAACTTTCCGGATCTTAACACCTACATGTACTACAATGAGAAGAGTGGGGGGCCCAACCACCAC
ACACCCCTTCCAGACAACTGGAGAAATCAGGTGGAACCAGAGACTGAGGCTGTTATACAGTGGATGGAATCCATCAACTT
TGTTCTTTCTGCCAATCTTCATGGAGGTGCAGTTGTAGCCAATTACCCATATGACAAGTCCCGTGAGCATCGGGTTCGGG
GTTTCCGTCGTACTGCTGATACTCCCACTCCAGATGATAAACTTTTCAGAAAGCTGGCCAA




Most similar to sp|Q2KJ83|CBPN_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q2KJ83|CBPN_BOVIN Carboxypeptidase N catalytic chain OS=Bos
           taurus GN=CPN1 PE=2 SV=1
          Length = 462

 Score =  427 bits (1099), Expect = e-119
 Identities = 199/239 (83%), Positives = 219/239 (91%), Gaps = 1/239 (0%)
 Frame = +2

Query: 146 VASVTFQHHRYDDLIRTLYKVHNECPHITRVYSIGRSVKGRHLYALEFGDFPGMHELLEP 325
           VA VTF+HHRYDDL+R LYKVHNECPHITRVYSIGRSVKGRHLY LEF D+PG+HE LEP
Sbjct: 17  VAPVTFRHHRYDDLVRMLYKVHNECPHITRVYSIGRSVKGRHLYVLEFSDYPGIHEPLEP 76

Query: 326 EFKYIGNMHGNEVLGRELLIQLCEFLCEEYRQRNERIVRLIHNTRIHILPSMNPDGYEV- 502
           E KY+GNMHGNEVLGRELL+QL EFLCEE+R RN+RIVRL+ +TRIHI+PSMNPDGYEV 
Sbjct: 77  EVKYVGNMHGNEVLGRELLLQLSEFLCEEFRNRNQRIVRLVEDTRIHIMPSMNPDGYEVA 136

Query: 503 AAEQGPDANGYLTGRNNANGVDLNRNFPDLNTYMYYNEKSGGPNHHTPLPDNWRNQVEPE 682
           AA Q  D +GYL GRNNANGVDLNRNFPDLNTY+YYNEK+GGPNHH PLPDNW++QVEPE
Sbjct: 137 AAAQERDISGYLVGRNNANGVDLNRNFPDLNTYIYYNEKNGGPNHHFPLPDNWKSQVEPE 196

Query: 683 TEAVIQWMESINFVLSANLHGGAVVANYPYDKSREHRVRGFRRTADTPTPDDKLFRKLA 859
           T+AVIQW+ S NFVLSANLHGGAVVANYPYDKS  HRVRGFRRTA+TPTPDDKLF+KLA
Sbjct: 197 TQAVIQWIRSFNFVLSANLHGGAVVANYPYDKSLGHRVRGFRRTANTPTPDDKLFQKLA 255