miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|89493821|gb|DY649615.1|DY649615 CCAGATACCACCTCTGTTTGGGTTTGCTTTCAGTACCTGACCTGTGCGGCTGTGCTTCTGTTACTGAAATTTTCTTTGGA
CATATTTGCCCCTGAATTGGGTTTTCTAGGGTTTCGAAACTATGCCGGGAAAGGGCTTTGTAAGCTACGGATATCTGCTC
TACCGCGAGTGATGAAGCTTTCTGTACACAATCCATTTCTAAGGTTAAGGCTGAGGTGGACAAAATGATTCTTACAAAGC
AGTATCGTTGCATACACTCAACAAGCTGTCAATGCACAAAAGGGCATCTAAGTGAAGATGCAATATTCCTAGTATTCCAG
CAGTTGAATTGGAATCCTAAGTTAATTGCTACACTTTCTTGTGTCTGCAAATGGTTTGATGATCTCGCCAAGCGTGTACT
GTGGAAGGAATTTTGCCGAACAAGAGCACCAAAGATGATGATTGATCTTCAATCTAGTGGGAGTCACAGTGTAGATGGGA
ACTGGAGGGCACTCGGGAAGCTGCTTATTTACTGTACAGGATCTAAGAAGGGTGGCCTCTTTAATACCATTCAAATCCCT
GGTCACTTTGTTTATAGGACCAGGTTCTCTAGGACATCTGGGAAGAGCTTTCTCTGCCCCAATGCCGACAGATGTTTTGT




Most similar to sp|Q9FLZ8|EDL2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9FLZ8|EDL2_ARATH EID1-like F-box protein 2 OS=Arabidopsis
           thaliana GN=EDL2 PE=2 SV=1
          Length = 249

 Score =  238 bits (608), Expect = 2e-62
 Identities = 107/132 (81%), Positives = 119/132 (90%)
 Frame = +3

Query: 225 MILTKQYRCIHSTSCQCTKGHLSEDAIFLVFQQLNWNPKLIATLSCVCKWFDDLAKRVLW 404
           MI+ KQYRCIHS +C CTKGHLSE+ +FL+ Q LNWNP +IATLSCVCKWFDDLAKR+LW
Sbjct: 1   MIIAKQYRCIHSATCHCTKGHLSEEVLFLMVQHLNWNPNVIATLSCVCKWFDDLAKRLLW 60

Query: 405 KEFCRTRAPKMMIDLQSSGSHSVDGNWRALGKLLIYCTGSKKGGLFNTIQIPGHFVYRTR 584
           KEFCR RAPKMM DLQSSGSHSVDG+WRALGKLLIYC+GS KGGLFN +QI GHFV+RTR
Sbjct: 61  KEFCRARAPKMMSDLQSSGSHSVDGSWRALGKLLIYCSGSSKGGLFNDVQISGHFVHRTR 120

Query: 585 FSRTSGKSFLCP 620
           FSRTSG+SFL P
Sbjct: 121 FSRTSGRSFLPP 132