miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|89847411|gb|DY703534.1|DY703534 TCATACTTGGGCCTTTTTCATTTTTGCCTTTTTTGGGTCCCCCCTCAAATTAGTACTTGGTCTATTCGGTCTTGGCAAGA
CGTGCAGTGAGGCCTTTATTAGCAAGCTTCTCATGAGTGTGTACTGGGAAAAAGGACCTTCAGAACCCATACCAACTGAA
AGGTCCTATATTGGCACACGAGGAGGCAACAGTGCACATAGCGGCCCTACTGCGTAGAAGCTCCTGGATGTCACTTGACA
ATTTGTGGGGGAGTTCGCTGCATTGGGAAAGGACTAGTGAATGCATACTCCTTAATGGTAAGACTTCAAATCCAGTTCTT
TTCCTCCTTTGGTTAAAAAAGGGAGGGAGAATGCCTTAGGATTTTTTGATATGGTAAGCAAACGGAGTGTGCATCTCGTT
TCTCTCTTCCCACAGTAGTATTCCCATGGAGTAGAATGTATTTCTTGGATTATGTTGGCTAACCCTGTTCTTTGCAGCTC
AGTTAAGTATCCAGTCTGGAACCTTTTAGCTCTCCATTCTATATGCTAACCTTGTCCTTTGGTCTGGCTGTTGTGGTGTG
CAAAATCCTGTATGGCGTCCTTTTTGCCACACTGCAACACTTTACAGATGTGGAGGATGTGAAATTTGTCATAAATTATG
ACTATCCTAACTCCTCTGAGGACTATATCCACCGCATTGGACGCACGGCCCGCAGTCAAAAAACGGGCACCGCCTACACC
TTCTTCACCCCCAACAACATGAAACAGGGCAGTGACCTCATAGCTGTGCTCCGTG




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  108 bits (271), Expect = 3e-23
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = +1

Query: 607 DVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQGSDLIAVLR 774
           DVEDVKFVINYDYPNSSEDYIHRIGRTARS KTGTAYTFFTPNN+KQ SDLI+VLR
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLR 461