miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|89958763|gb|DY745172.1|DY745172 CAGATAAATACAGTCCCTGGGAGTATCACAATGCTGTTTTCTTTTGTAAAGTGGACATGATAAGAGTTTTTTGTTTTGTT
TTGTTTTGTTTTTCAGCGCAAGTGGTCAAAAGTTGTCAAAATTGTCTTCATTCCTCGATTGTCTCTTTTTTACCAGTCTC
TTGCCCTTCAAACAGAGGATACCTGGCCTCCACATCGGCCCATGTGATGCTGCCATTGGCTAGGTCTCGGACTATGCTGG
GCAGCTCAGAGACCTCTGCTCTTATCTGCCGCATTGAGTCACGGTCCCTCAGAGTTGCTGTGTGGGGGGTCTTGTTCACT
GTGTCAAAGTCAATGGTGACACCAAAAGCCACGCCAATCTCATCAGTCCTGGCGTAGCGCCTTCCAATTGACCCAGAGGA
ATCGTCTACCTTGTGAGACACTCCGTGCCTGGTGAGGGCTTCCGATAATTCCTTGACAAATGGCATGAACTCCTGGTTTT
GGCTCAGTGGGACGACGGAACATTTTAATGGAGCGACTACAGCCCGGAAACTCAAGAATGTTCTCTGTTCATCTCCTTCT
CGTACGTGGAATGTATGTTCAACTACGGTATACATGATCCTACCCAGCCGAAAGGAAGGTTCAATTACGTTCGGACAACT
TCTT




Most similar to sp|Q5RBL1|SYG_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5RBL1|SYG_PONAB Glycyl-tRNA synthetase OS=Pongo abelii GN=GARS
            PE=2 SV=1
          Length = 739

 Score =  323 bits (828), Expect = 6e-88
 Identities = 161/168 (95%), Positives = 163/168 (97%)
 Frame = -2

Query: 634  PNVIEPSFRLGRIMYTVVEHTFHVREGDEQRTFLSFRAVVAPLKCSVVPLSQNQEFMPFV 455
            PNVIEPSF LGRIMYTV EHTFHVREGDEQRTF SF AVVAP KCSV+PLSQNQEFMPFV
Sbjct: 572  PNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFV 631

Query: 454  KELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDS 275
            KELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDS
Sbjct: 632  KELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDS 691

Query: 274  MRQIRAEVSELPSIVRDLANGSITWADVEARYPLFEGQETGKKETIEE 131
            MRQIRAEVSELPSIVRDLANG+ITWADVEARYPLFEGQETGKKETIEE
Sbjct: 692  MRQIRAEVSELPSIVRDLANGNITWADVEARYPLFEGQETGKKETIEE 739