miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|90179887|gb|CR371494.2|CR371494 GGGAAGAATATGCACTGTCCAGCTTCAGGGATCAGAGGCACCGTGTTCCCGGTGGTTTATGTGGATGACAGCGCCATCTT
AGACTGCCAGTTCAGTGACTTCTACCATACGGCACCGCAAGGCTTCGAGAAGATTCTGTTTGAGCAGCAGATCTTCTGAG
CAGCACCTCCGTATACCTCCAGACCTTTATACATACACACACACACAACCCTCAGCTAAAAGTGTTCCTTGTTGCTCTGC
AGAAATCTGTAACCTCTTCGTTCCGACTGGTTTGAGCATCCCTTTGTGTGTGTGTGTGTGTTGTGTTGTGTTGCGTCCTG
GTTACGCTCTGCTTTAATGCTGTTCTGGGTCAATGTGGGTAGTTTAGCTCTTGTTTGATGCCAACACTGGAGCAGTAAGA
AAACGGATCCCCAGACAACAGTGAATGGCATAAAGTAGACAAAGTGTGGTGTGCATTTGCAACTGAAAGACAGTCAAGTC
AGTCAATATTTATTTTATTCAGTTATAATCATCCTGCATTGCCTCAATCTTTTATGGGAGCTGCTTCTTTCAGAAAAGAG
AGTTTAAACAATGTTTAGGTGTTTTCTTATTTATATTTATTTGTTAAGCTGACACTAATGTTCAATGGTTTGTTTCCCTG
ATAATTTACATCTAATTCTAGATTTAATTATATGTATTTTGATTTGCTATTTTACTTATGATCTGTCTTTTAAAGTAATT
TGTCACGGCTCTGATTGGCATTCCAAATATCAGCAATCTGGCGAAACTCTGCTCATTGGCTGTATTTGGGGATGTGACAT
TTTCTGACCCTACTGTATTTAACCGG




Most similar to sp|Q5M7T2|CLLD6_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
           PE=2 SV=1
          Length = 196

 Score =  106 bits (265), Expect = 2e-22
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = +1

Query: 1   GKNMHCPASGIRGTVFPVVYVDDSAILDCQFSDFYHTAPQGFEKILFEQQIF 156
           GKNMHCPASGIRGTV+PVVYVDDSAILDCQFS+FYHT P GFEKILFEQQIF
Sbjct: 145 GKNMHCPASGIRGTVYPVVYVDDSAILDCQFSEFYHTPPPGFEKILFEQQIF 196