miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|9300535|gb|BE358978.1|BE358978 CTTCGCGGTGCTGGTGGAGTACGAGGACGGCGACGGCGACGTGGTGCAGGTGGACCTGATGGAGTCCAAGACGGCGCACG
GGCCCCCGACGGGGCGGTGGACGCCCATGCGCGAGTCCTGGGGATCCATCTGGCGGATGGACACCAACCACCGCATGCAG
CCGCCCTTCTCCATCCGCATCCGCAACGAGTCCGGCAAGACGCTCGTCGCCAGAAACGTCATCCCGGCCAACTGGAGGCC
CAACACTTTCTACCGCTCCTTCGTCCAGTACCAGTAGTAGCACGTACGTACCTGATTGATTGATTGATTGATTGGATCCC
AGCCCAGCCCGGCCCAGCCCGCAATTGGAGTGGAATCCGGCTCGGTTCGGTTCGGTTCGGTCATCATCATCACTACGTAC
GTACTATACGCTACTACCACTAGAACG




Most similar to sp|Q94LR4|EXPB4_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q94LR4|EXPB4_ORYSJ Expansin-B4 OS=Oryza sativa subsp. japonica
           GN=EXPB4 PE=2 SV=1
          Length = 286

 Score =  187 bits (476), Expect = 1e-47
 Identities = 86/90 (95%), Positives = 88/90 (97%)
 Frame = +2

Query: 2   FAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRMDTNHRMQPPFSIRI 181
           FAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWR+DTNHR+Q PFSIRI
Sbjct: 196 FAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRI 255

Query: 182 RNESGKTLVARNVIPANWRPNTFYRSFVQY 271
           RNESGKTLVA NVIPANWRPNTFYRSFVQY
Sbjct: 256 RNESGKTLVANNVIPANWRPNTFYRSFVQY 285