miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|94475475|gb|EB704433.1|EB704433 GGACGAGGAGGGCCACCACGGCGGTGGAGCCGACGATGCCGGAGGAGGTGCCGGCGAGCGGGCAGCTGCAGCTTGGCCGC
GCCACGCGCCCGCACGCGCACGCCAGCGCCGCCATATCGTCCACCCGCCGGAAGCCCCGCTGCAGCGCCGCGCGCCACGC
GCGCTCCTCCTCCGCCCGCTCCGACCAGGCGGCGCTGCCCGACGCCGCCGACTCCTGCCGCCGCCGCAGGAAGGTGGCTC
CCTCCCTGGCCAGCTCCTCCGCCACCACCTCGTGCATCCGGTCCCGGCATAACGCGGACACATGGGAGCCGCCGTGGCCG
TCAAAGACGCCGAAGAAGTGCATGGGCGAGCCGTCGGCGGCCCAGGTGCACAAGTCCGGATGGAGCGAGACGGCGTCCTC
CATCATCCGCATCCGCCCCGCCATGGACAGGGAGCCGAAGGCCACGGGCCACACCTGCGGGGCGACGGCGACGGCCTCGG
CTTCAGGTTCACCTTCAGCCTCGCCGGGCTCGAGCTGCGGCCCCGCCGGCGCGAGCTCCACCTCCACCTCATGGTCGAGC
TCTTCCTGCTCCTCGTCGTTGGGCCTGTCCGCAGAGCTCTGGGACGACGACGGCGACAGCGATGGCGACGGCGACGGCGA
GAACCGGGAGGCCGCAGGACGGAGACGGCGCACCCAGCTCGGGCCCGGCGCCGCAGCGGCGGCGGCGTCCCCGGATCCTT
GGGGCTCG




Most similar to sp|Q7XP01|P2C37_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7XP01|P2C37_ORYSJ Probable protein phosphatase 2C 37 OS=Oryza
           sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2
          Length = 474

 Score =  121 bits (304), Expect = 4e-27
 Identities = 73/146 (50%), Positives = 85/146 (58%)
 Frame = -2

Query: 439 FGSLSMAGRMRMMEDAVSLHPDLCTWAADGSPMHFFGVFDGHGGSHVSALCRDRMHEVVA 260
           FGS+S+AGRMR MEDAVSL P  CTW  DGSPMHFF VFDGHGG HVSALCR++MH +VA
Sbjct: 114 FGSVSLAGRMRDMEDAVSLRPSFCTWL-DGSPMHFFAVFDGHGGPHVSALCREQMHVIVA 172

Query: 259 EELAREGATFLRRRQXXXXXXXXXXXXXXXXXXXXXXALQRGFRRVDDMAALACACGRVA 80
           EE+  E A  LR+RQ                       L+ G R       +        
Sbjct: 173 EEMVAEAAA-LRQRQ---PAAMEEEEEERAVAGGAVAELRPGGRAGGGGVRVRAR----H 224

Query: 79  RPSCSCPLAGTSSGIVGSTAVVALLV 2
           R    CPL+G +  I+GSTAVVALLV
Sbjct: 225 RAGVPCPLSGQTGAIIGSTAVVALLV 250