miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|94977406|gb|DW527273.1|DW527273 ATTCCGAGAATGTGGATGAAGACTCTTCAGACTCAGATGCCACTGCATCATCAGATAACAGCGAGACCGAGGGGACACCC
AAGTTGTCTGACACACCGGCCCCTAAGAGGAAGAGAAGCCCTCCGCTGGGGGGGGCCCCCTCTCCCTCCAGCCTCTCCCT
GCCTCCTTCAACAGGGTTTCCCCTTCAGGCCTCCGGGGTTCCCTCCCCATACCTGAGCTCGCTGGCCTCCCCCCGCTACC
CCCCATTCCCTTCTGACTACCTGGCCCTGCAGCTGCCCGAGCCCAGCCCCCTGAGGCCCAAGCGGGAGAAACGGCCCCGC
CTGCCCCGGAAACTCAAGATGGCGGTGGGGCCCCCTGACTGCCCTGTGGGAGGACCGCTGACCTTCCCTGGCCGGGGTTC
TGGGGCTGGGGTCGGGACAGCCCTGA




Most similar to sp|Q8NBZ0|IN80E_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8NBZ0|IN80E_HUMAN INO80 complex subunit E OS=Homo sapiens
           GN=INO80E PE=1 SV=1
          Length = 244

 Score =  148 bits (373), Expect = 1e-35
 Identities = 77/119 (64%), Positives = 77/119 (64%)
 Frame = +3

Query: 69  EGTPKLSDTPAPKRKRXXXXXXXXXXXXXXXXXXTGFPLQASGVPSPYLSSLASPRYPPF 248
           EGTPKLSDTPAPKRKR                  TGFPLQASGVPSPYLSSLAS RYPPF
Sbjct: 82  EGTPKLSDTPAPKRKRSPPLGGAPSPSSLSLPPSTGFPLQASGVPSPYLSSLASSRYPPF 141

Query: 249 PSDYLALQXXXXXXXXXXXXXXXXXXXXXXMAVGPPDCPVGGPLTFPGRGSGAGVGTAL 425
           PSDYLALQ                      MAVGPPDCPVGGPLTFPGRGSGAGVGT L
Sbjct: 142 PSDYLALQLPEPSPLRPKREKRPRLPRKLKMAVGPPDCPVGGPLTFPGRGSGAGVGTTL 200